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Time dependent inputs to reaction network in Catalyst
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5
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89
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February 11, 2025
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Error: MethodError: no method matching validate
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9
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52
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December 2, 2024
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Possibility of factorization for ODEs produced by a mass action chemical reaction network
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1
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39
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November 22, 2024
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Getting Catalyst and Oscar to work together
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10
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182
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November 20, 2024
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Finding steady-states symbolicaly
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17
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300
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October 14, 2024
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Parameters modified by events are not captured in ODE the solution
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1
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100
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May 23, 2024
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Callback function modifying model parameter
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15
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236
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May 22, 2024
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Can a callback be triggered at the initial time point (at t=0)
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2
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111
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May 16, 2024
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Implement Matlab/Simbiology concepts (e.g. compartments, repeated assignments) in Julia/Catalyst
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9
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270
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May 15, 2024
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Gradient-based parameter estimation for Catalyst.jl models
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1
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217
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April 5, 2024
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Zero Order Extinction Reaction
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21
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604
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March 27, 2024
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@unpack from Catalyst reaction system and unused variables
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9
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204
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February 26, 2024
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SBMLToolkit and Catalyst Warnings
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3
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283
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January 29, 2024
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UndefVarError when using `EnsembleDistributed()` to solve `ODEProblem`
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1
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266
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December 14, 2023
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Unable to reproduce Catalyst.jl Example
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21
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760
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November 13, 2023
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Unpacking of variables that do not exist
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11
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485
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October 31, 2023
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Efficient simulation of spatially coupled ODEs on arbitrary graphs
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5
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317
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June 29, 2023
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Memory usage while solving `JumpProblem` increases with run time, even with `save_positions=(false,false)`
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37
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700
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April 25, 2023
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Catalyst.jl VariableRateJump
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5
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401
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April 7, 2023
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Catalyst.jl: Algebraically relate two species
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2
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406
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March 9, 2023
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Anybody know why this error occurs when trying to define a Catalyst @reaction_network in Jupyter Notebooks?
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4
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451
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January 19, 2023
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How to partilly instantiate parameters of a reaction network in Catalyst (or ModelingToolkit ?)
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4
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351
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September 20, 2022
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Catalyst.jl compositions with parameters as stoichiometric constants
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4
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715
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August 19, 2022
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How to use Interact.jl to make sliders for reaction network parameters
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3
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429
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June 21, 2022
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Creating sliders for parameters of reaction network to make interactive plot
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1
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384
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June 17, 2022
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How to model a chemical reaction network with changing parameters? (Catalyst.jl)
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5
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881
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April 14, 2022
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Best way to export Catalyst models to SBML format
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2
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494
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February 7, 2022
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How does ModelingToolkit substitute the u0map?
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2
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615
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December 7, 2021
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Random warning messages with Catalyst
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11
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1892
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October 24, 2021
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Solving chemical systems of equations with both equilibrium and kinetic species
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1
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1069
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September 25, 2021
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