|
Calling complete() adds differential constraints to algebraic extension of ReactionSystem
|
|
2
|
26
|
July 28, 2025
|
|
Catalyst.jl - updating kinetic parameters to be time-dependent after loading a reaction network
|
|
12
|
93
|
July 27, 2025
|
|
Catalyst.jl - what is the appropriate way to model equilibrium (i.e. pKa?)
|
|
8
|
126
|
July 24, 2025
|
|
Issue with scoping rules of parameter (and variable) declaration in components (Catalyst vs ModelingToolkit)
|
|
8
|
103
|
July 2, 2025
|
|
Catalyst.jl - what is the appropriate way to model energy?
|
|
6
|
150
|
June 23, 2025
|
|
Building Catalyst.jl reaction network from a .csv file - error in construction?
|
|
6
|
79
|
June 20, 2025
|
|
Time-plotting the derivative of a species (reaction velocity) in catalyst
|
|
1
|
70
|
June 16, 2025
|
|
Using Catalyst and Symbolics/ModelingToolkit together
|
|
7
|
159
|
April 8, 2025
|
|
Modelling caffeïne effect on alertness in humans with Catalyst
|
|
4
|
162
|
April 7, 2025
|
|
Adding jump to JumpProblem defined from Catalyst model
|
|
2
|
33
|
April 7, 2025
|
|
Is there a way to dynamically add/remove of reactions from ReactionSystem in catalyst
|
|
3
|
62
|
April 7, 2025
|
|
Cannot recreate JumpProcess example in Catalyst
|
|
0
|
24
|
March 22, 2025
|
|
Time dependent inputs to reaction network in Catalyst
|
|
5
|
134
|
February 11, 2025
|
|
Error: MethodError: no method matching validate
|
|
9
|
65
|
December 2, 2024
|
|
Possibility of factorization for ODEs produced by a mass action chemical reaction network
|
|
1
|
42
|
November 22, 2024
|
|
Getting Catalyst and Oscar to work together
|
|
10
|
228
|
November 20, 2024
|
|
Finding steady-states symbolicaly
|
|
17
|
344
|
October 14, 2024
|
|
Parameters modified by events are not captured in ODE the solution
|
|
1
|
108
|
May 23, 2024
|
|
Callback function modifying model parameter
|
|
15
|
282
|
May 22, 2024
|
|
Can a callback be triggered at the initial time point (at t=0)
|
|
2
|
126
|
May 16, 2024
|
|
Implement Matlab/Simbiology concepts (e.g. compartments, repeated assignments) in Julia/Catalyst
|
|
9
|
295
|
May 15, 2024
|
|
Gradient-based parameter estimation for Catalyst.jl models
|
|
1
|
223
|
April 5, 2024
|
|
Zero Order Extinction Reaction
|
|
21
|
633
|
March 27, 2024
|
|
@unpack from Catalyst reaction system and unused variables
|
|
9
|
234
|
February 26, 2024
|
|
SBMLToolkit and Catalyst Warnings
|
|
3
|
289
|
January 29, 2024
|
|
UndefVarError when using `EnsembleDistributed()` to solve `ODEProblem`
|
|
1
|
267
|
December 14, 2023
|
|
Unable to reproduce Catalyst.jl Example
|
|
21
|
808
|
November 13, 2023
|
|
Unpacking of variables that do not exist
|
|
11
|
501
|
October 31, 2023
|
|
Efficient simulation of spatially coupled ODEs on arbitrary graphs
|
|
5
|
327
|
June 29, 2023
|
|
Memory usage while solving `JumpProblem` increases with run time, even with `save_positions=(false,false)`
|
|
37
|
739
|
April 25, 2023
|