Callback function modifying model parameter

General Usage
,
1

I need to modify a parameter in an ODE problem in a callback. I found an example that does exactly what I want in here. (on the page search for PresetTimeCallback and it is the code including the first occurrence). Copied here for convenience:

rn = @reaction_network begin
    (k,1), X1 <--> X2
end
u0 = [:X1 => 10.0,:X2 => 0.0]
tspan = (0.0, 20.0)
p = [:k => 1.0]
oprob = ODEProblem(rn, u0, tspan, p)

condition = [5.0]
affect!(integrator) = integrator[:k] = 5.0
ps_cb = PresetTimeCallback(condition, affect!)

sol = solve(deepcopy(oprob); callback = ps_cb)
plot(sol)

When trying to run int in REPL it fails with the error message:

ERROR: LoadError: Parameter indexing is deprecated. Use `setp(sys, k)(integrator, 5.0)` to set parameter value.

The error seems to be in trying to modify the parameter value using integrator[:k].

Many thanks for your help.

3 
integrator.ps[:k]
integrator.ps[rn.k]
4

Now I am getting:

ERROR: LoadError: type ODEIntegrator has no field ps

If it is working for you it may mean my installation (or packages) are somehow corrupted.

Many thanks for your input.

5

Share ]st. This is a rather recent addition.

CC @cryptic.ax

6

Full code

using Catalyst, DifferentialEquations, Plots

rn = @reaction_network begin
    (k,1), X1 <--> X2
end
u0 = [:X1 => 10.0,:X2 => 0.0]
tspan = (0.0, 20.0)
p = [:k => 1.0]
oprob = ODEProblem(rn, u0, tspan, p)

condition = [5.0]
#affect!(integrator) = integrator[:k] = 5.0
#affect!(integrator) = integrator.ps[:k] = 5.0
affect!(integrator) = integrator.ps[rn.k] = 5.0
ps_cb = PresetTimeCallback(condition, affect!)

sol = solve(deepcopy(oprob); callback = ps_cb)
plot(sol)

Error message is HUGE I could not even post it but hopefully I have included enough.

julia> include("cbtest3.jl")
ERROR: LoadError: type ODEIntegrator has no field ps
Stacktrace:
  [1] getproperty(integ::OrdinaryDiffEq.ODEIntegrator{CompositeAlgorithm{Tuple{Tsit5{typeof(OrdinaryDiffEq.trivial_limiter!), 
    @ OrdinaryDiffEq c:\Users\......\.julia\packages\OrdinaryDiffEq\NBaQM\src\integrators\type.jl:195
  [2] affect!(integrator::OrdinaryDiffEq.ODEIntegrator{CompositeAlgorithm{Tuple{Tsit5{typeof(OrdinaryDiffEq.trivial_limiter!), 
    @ Main C:\Projects\JT\cbtest3.jl:14
  [3] (::DiffEqCallbacks.var"#111#114"{typeof(affect!)})(integrator::OrdinaryDiffEq.ODEIntegrator{CompositeAlgorithm{Tuple{Tsit5{
    @ DiffEqCallbacks c:\Users\......\.julia\packages\DiffEqCallbacks\uVI0B\src\preset_time.jl:32
  [4] apply_discrete_callback!
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\callbacks.jl:605 [inlined]
  [5] handle_callbacks!(integrator::OrdinaryDiffEq.ODEIntegrator{CompositeAlgorithm{Tuple{Tsit5{typeof(OrdinaryDiffEq.trivial_limiter!),
    @ OrdinaryDiffEq c:\Users\......\.julia\packages\OrdinaryDiffEq\NBaQM\src\integrators\integrator_utils.jl:346
  [6] _loopfooter!(integrator::OrdinaryDiffEq.ODEIntegrator{CompositeAlgorithm{Tuple{Tsit5{typeof(OrdinaryDiffEq.trivial_limiter!), 
    @ OrdinaryDiffEq c:\Users\......\.julia\packages\OrdinaryDiffEq\NBaQM\src\integrators\integrator_utils.jl:253
  [7] loopfooter!
    @ c:\Users\......\.julia\packages\OrdinaryDiffEq\NBaQM\src\integrators\integrator_utils.jl:206 [inlined]
  [8] solve!(integrator::OrdinaryDiffEq.ODEIntegrator{CompositeAlgorithm{Tuple{Tsit5{typeof(OrdinaryDiffEq.trivial_limiter!), 
    @ OrdinaryDiffEq c:\Users\......\.julia\packages\OrdinaryDiffEq\NBaQM\src\solve.jl:545
  [9] #__solve#746
    @ c:\Users\......\.julia\packages\OrdinaryDiffEq\NBaQM\src\solve.jl:6 [inlined]
 [10] __solve
    @ c:\Users\......\.julia\packages\OrdinaryDiffEq\NBaQM\src\solve.jl:1 [inlined]
 [11] solve_call(_prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, Vector{Float64}, ODEFunction{true, SciMLBase.AutoSpecialize, 
    @ DiffEqBase c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:608
 [12] solve_call
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:566 [inlined]
 [13] #solve_up#42
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:1057 [inlined]
 [14] solve_up
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:1043 [inlined]
 [15] #solve#40
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:980 [inlined]
 [16] __solve(::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, Vector{Float64}, ODEFunction{true, SciMLBase.AutoSpecialize, 
    @ DifferentialEquations c:\Users\......\.julia\packages\DifferentialEquations\zEcqZ\src\default_solve.jl:14
 [17] __solve
    @ c:\Users\......\.julia\packages\DifferentialEquations\zEcqZ\src\default_solve.jl:1 [inlined]
 [18] #__solve#61
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:1370 [inlined]
 [19] __solve
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:1363 [inlined]
 [20] #solve_call#34
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:608 [inlined]
 [21] solve_call
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:566 [inlined]
 [22] #solve_up#42
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:1049 [inlined]
 [23] solve_up
    @ c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:1043 [inlined]
 [24] solve(::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, Vector{Float64}, ODEFunction{true, SciMLBase.AutoSpecialize, 
 ModelingToolkit.var"#k#503"{RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0x02e1cf0e, 0x39022fd4, 0x3614d355, 0x210f73da, 0x1dba78cd), Nothing}, RuntimeGeneratedFunctions.RuntimeGeneratedFunction{(:ˍ₋out, :ˍ₋arg1, :ˍ₋arg2, :t), ModelingToolkit.var"#_RGF_ModTag", ModelingToolkit.var"#_RGF_ModTag", (0xe7ad4c43, 0xe16a0c3f, 0x427d1030, 0x5ec58b33, 0xe2d3dd17), Nothing}}, LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, ModelingToolkit.var"#662#generated_observed#513"{Bool, ODESystem, Dict{Any, Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}, Nothing, ODESystem}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, SciMLBase.StandardODEProblem}; sensealg::Nothing, u0::Nothing, p::Nothing, wrap::Val{true}, kwargs::Base.Pairs{Symbol, DiscreteCallback{DiffEqCallbacks.var"#110#113"{Vector{Float64}}, DiffEqCallbacks.var"#111#114"{typeof(affect!)}, DiffEqCallbacks.var"#112#115"{typeof(SciMLBase.INITIALIZE_DEFAULT), Bool, Vector{Float64}, typeof(affect!)}, typeof(SciMLBase.FINALIZE_DEFAULT)}, Tuple{Symbol}, NamedTuple{(:callback,), Tuple{DiscreteCallback{DiffEqCallbacks.var"#110#113"{Vector{Float64}}, DiffEqCallbacks.var"#111#114"{typeof(affect!)}, DiffEqCallbacks.var"#112#115"{typeof(SciMLBase.INITIALIZE_DEFAULT), Bool, Vector{Float64}, typeof(affect!)}, typeof(SciMLBase.FINALIZE_DEFAULT)}}}})
    @ DiffEqBase c:\Users\......\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:980
 [25] top-level scope
    @ C:\Projects\JT\cbtest3.jl:17
in expression starting at C:\Projects\JT\cbtest3.jl:17

julia>

Also if it helps this are the packages I have installed in Julia 1.9.4

  "CSV"                    => v"0.10.14"
  "SBMLImporter"           => v"1.1.1"
  "Optimization"           => v"3.20.2"
  "Suppressor"             => v"0.2.7"
  "Arrow"                  => v"2.7.2"
  "Catalyst"               => v"13.5.1"
  "Symbolics"              => v"5.14.1"
  "OrdinaryDiffEq"         => v"6.66.0"
  "Plots"                  => v"1.40.4"
  "Latexify"               => v"0.16.3"
  "ModelingToolkit"        => v"8.75.0"
  "SBMLToolkit"            => v"0.1.25"
  "RCall"                  => v"0.13.18"
  "DifferentialEquations"  => v"7.13.0"
  "OptimizationOptimisers" => v"0.1.6"
  "RecursiveArrayTools"    => v"3.3.3"
  "DataFrames"             => v"1.6.1"
  "HetaSimulator"          => v"0.5.1"
  "SciMLSensitivity"       => v"7.51.0"
  "GraphRecipes"           => v"0.5.12"
7

Hi! Judging by your ModelingToolkit version you might be on the borderline for when .ps was implemented. What version of SymbolicIndexingInterface.jl and SciMLBase.jl are you using? Just pasting the output of ]st -m would be helpful.

8

Thank you. Here is the output. from ]st.

(@v1.9) pkg> st
Status `C:\Users\valer\.julia\environments\v1.9\Project.toml`
  [69666777] Arrow v2.7.2
  [336ed68f] CSV v0.10.14
  [479239e8] Catalyst v13.5.1
  [a93c6f00] DataFrames v1.6.1
  [0c46a032] DifferentialEquations v7.13.0
⌃ [bd48cda9] GraphRecipes v0.5.12
  [630b40c4] HetaSimulator v0.5.1
  [23fbe1c1] Latexify v0.16.3
⌅ [961ee093] ModelingToolkit v8.75.0
⌃ [7f7a1694] Optimization v3.20.2
⌃ [42dfb2eb] OptimizationOptimisers v0.1.6
⌅ [1dea7af3] OrdinaryDiffEq v6.66.0
  [91a5bcdd] Plots v1.40.4
⌃ [6f49c342] RCall v0.13.18
⌅ [731186ca] RecursiveArrayTools v3.3.3
  [210efffb] SBMLImporter v1.1.1
  [86080e66] SBMLToolkit v0.1.25
⌅ [1ed8b502] SciMLSensitivity v7.51.0
  [fd094767] Suppressor v0.2.7
⌅ [0c5d862f] Symbolics v5.14.1
  [8ba89e20] Distributed
Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated`

(@v1.9) pkg> status --outdated
Status `C:\Users\valer\.julia\environments\v1.9\Project.toml`
⌃ [bd48cda9] GraphRecipes v0.5.12 (<v0.5.13)
⌅ [961ee093] ModelingToolkit v8.75.0 (<v9.14.0): Catalyst, ReactionNetworkImporters, SBMLImporter
⌃ [7f7a1694] Optimization v3.20.2 (<v3.25.0)
⌃ [42dfb2eb] OptimizationOptimisers v0.1.6 (<v0.2.1)
⌅ [1dea7af3] OrdinaryDiffEq v6.66.0 (<v6.77.1): julia
⌃ [6f49c342] RCall v0.13.18 (<v0.14.1)
⌅ [731186ca] RecursiveArrayTools v3.3.3 (<v3.19.0): julia
⌅ [1ed8b502] SciMLSensitivity v7.51.0 (<v7.58.0): julia
⌅ [0c5d862f] Symbolics v5.14.1 (<v5.28.0): julia
9

You need to specify the -m flag as well, to get all packages in the manifest. Instead of ]st, try ]st -m

10

Well … it seems I am in the worst situation - see the error on the end of the post.
I have uninstalled Julia 1.9.4 and installed a fresh copy of 1.10.3.
Here is what I have now:

(@v1.10) pkg> st -m
Status `C:\Users\valer\.julia\environments\v1.10\Manifest.toml`
⌅ [47edcb42] ADTypes v0.2.7
  [1520ce14] AbstractTrees v0.4.5
  [7d9f7c33] Accessors v0.1.36
  [79e6a3ab] Adapt v4.0.4
  [66dad0bd] AliasTables v1.1.3
  [ec485272] ArnoldiMethod v0.4.0
  [4fba245c] ArrayInterface v7.10.0
  [4c555306] ArrayLayouts v1.9.3
  [aae01518] BandedMatrices v1.7.0
  [e2ed5e7c] Bijections v0.1.6
  [d1d4a3ce] BitFlags v0.1.8
  [62783981] BitTwiddlingConvenienceFunctions v0.1.5
  [764a87c0] BoundaryValueDiffEq v5.7.1
  [fa961155] CEnum v0.5.0
  [2a0fbf3d] CPUSummary v0.2.5
  [00ebfdb7] CSTParser v3.4.3
  [49dc2e85] Calculus v0.5.1
  [479239e8] Catalyst v13.5.1
  [d360d2e6] ChainRulesCore v1.23.0
  [fb6a15b2] CloseOpenIntervals v0.1.12
  [944b1d66] CodecZlib v0.7.4
  [35d6a980] ColorSchemes v3.25.0
  [3da002f7] ColorTypes v0.11.5
  [c3611d14] ColorVectorSpace v0.10.0
  [5ae59095] Colors v0.12.11
  [861a8166] Combinatorics v1.0.2
  [a80b9123] CommonMark v0.8.12
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.0
  [34da2185] Compat v4.15.0
  [b152e2b5] CompositeTypes v0.1.4
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [f0e56b4a] ConcurrentUtilities v2.4.1
  [187b0558] ConstructionBase v1.5.5
  [d38c429a] Contour v0.6.3
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [bcd4f6db] DelayDiffEq v5.47.3
  [8bb1440f] DelimitedFiles v1.9.1
  [2b5f629d] DiffEqBase v6.151.1
⌅ [459566f4] DiffEqCallbacks v2.37.0
  [77a26b50] DiffEqNoiseProcess v5.21.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [0c46a032] DifferentialEquations v7.13.0
  [b4f34e82] Distances v0.10.11
  [31c24e10] Distributions v0.25.108
  [ffbed154] DocStringExtensions v0.9.3
⌅ [5b8099bc] DomainSets v0.6.7
  [fa6b7ba4] DualNumbers v0.6.8
  [7c1d4256] DynamicPolynomials v0.5.7
  [4e289a0a] EnumX v1.0.4
  [f151be2c] EnzymeCore v0.7.2
  [460bff9d] ExceptionUnwrapping v0.1.10
  [d4d017d3] ExponentialUtilities v1.26.1
  [e2ba6199] ExprTools v0.1.10
  [c87230d0] FFMPEG v0.4.1
  [9d29842c] FastAlmostBandedMatrices v0.1.1
  [7034ab61] FastBroadcast v0.2.8
  [9aa1b823] FastClosures v0.3.2
  [29a986be] FastLapackInterface v2.0.3
  [1a297f60] FillArrays v1.11.0
  [6a86dc24] FiniteDiff v2.23.1
  [53c48c17] FixedPointNumbers v0.8.5
  [1fa38f19] Format v1.3.7
  [f6369f11] ForwardDiff v0.10.36
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
  [d9f16b24] Functors v0.4.10
  [46192b85] GPUArraysCore v0.1.6
  [28b8d3ca] GR v0.73.5
  [c145ed77] GenericSchur v0.5.4
  [c27321d9] Glob v1.3.1
  [86223c79] Graphs v1.11.0
  [42e2da0e] Grisu v1.0.2
  [cd3eb016] HTTP v1.10.8
  [3e5b6fbb] HostCPUFeatures v0.1.16
  [34004b35] HypergeometricFunctions v0.3.23
  [615f187c] IfElse v0.1.1
  [d25df0c9] Inflate v0.1.4
  [8197267c] IntervalSets v0.7.10
  [3587e190] InverseFunctions v0.1.14
  [92d709cd] IrrationalConstants v0.2.2
  [82899510] IteratorInterfaceExtensions v1.0.0
  [1019f520] JLFzf v0.1.7
  [692b3bcd] JLLWrappers v1.5.0
  [682c06a0] JSON v0.21.4
  [98e50ef6] JuliaFormatter v1.0.56
  [ccbc3e58] JumpProcesses v9.11.1
  [ef3ab10e] KLU v0.6.0
  [ba0b0d4f] Krylov v0.9.6
  [b964fa9f] LaTeXStrings v1.3.1
  [2ee39098] LabelledArrays v1.16.0
  [984bce1d] LambertW v0.4.6
  [23fbe1c1] Latexify v0.16.3
  [10f19ff3] LayoutPointers v0.1.15
  [5078a376] LazyArrays v1.10.0
  [2d8b4e74] LevyArea v1.0.0
  [d3d80556] LineSearches v7.2.0
  [7ed4a6bd] LinearSolve v2.30.0
  [2ab3a3ac] LogExpFunctions v0.3.27
  [e6f89c97] LoggingExtras v1.0.3
  [bdcacae8] LoopVectorization v0.12.170
  [d8e11817] MLStyle v0.4.17
  [1914dd2f] MacroTools v0.5.13
  [d125e4d3] ManualMemory v0.1.8
⌅ [a3b82374] MatrixFactorizations v2.2.0
  [bb5d69b7] MaybeInplace v0.1.2
  [739be429] MbedTLS v1.1.9
  [442fdcdd] Measures v0.3.2
  [e1d29d7a] Missings v1.2.0
⌅ [961ee093] ModelingToolkit v8.75.0
  [46d2c3a1] MuladdMacro v0.2.4
  [102ac46a] MultivariatePolynomials v0.5.5
  [d8a4904e] MutableArithmetics v1.4.4
  [d41bc354] NLSolversBase v7.8.3
  [2774e3e8] NLsolve v4.5.1
  [77ba4419] NaNMath v1.0.2
⌃ [8913a72c] NonlinearSolve v3.11.0
  [6fe1bfb0] OffsetArrays v1.14.0
  [4d8831e6] OpenSSL v1.4.3
  [429524aa] Optim v1.9.4
  [bac558e1] OrderedCollections v1.6.3
  [1dea7af3] OrdinaryDiffEq v6.77.1
  [90014a1f] PDMats v0.11.31
  [65ce6f38] PackageExtensionCompat v1.0.2
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [b98c9c47] Pipe v1.3.0
  [ccf2f8ad] PlotThemes v3.1.0
  [995b91a9] PlotUtils v1.4.1
  [91a5bcdd] Plots v1.40.4
  [e409e4f3] PoissonRandom v0.4.4
  [f517fe37] Polyester v0.7.14
  [1d0040c9] PolyesterWeave v0.2.1
  [85a6dd25] PositiveFactorizations v0.2.4
  [d236fae5] PreallocationTools v0.4.21
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [43287f4e] PtrArrays v1.1.0
  [1fd47b50] QuadGK v2.9.4
  [74087812] Random123 v1.7.0
  [e6cf234a] RandomNumbers v1.5.3
  [3cdcf5f2] RecipesBase v1.3.4
  [01d81517] RecipesPipeline v0.6.12
  [731186ca] RecursiveArrayTools v3.19.0
  [f2c3362d] RecursiveFactorization v0.2.23
  [189a3867] Reexport v1.2.2
  [05181044] RelocatableFolders v1.0.1
  [ae029012] Requires v1.3.0
  [ae5879a3] ResettableStacks v1.1.1
  [79098fc4] Rmath v0.7.1
  [7e49a35a] RuntimeGeneratedFunctions v0.5.13
  [94e857df] SIMDTypes v0.1.0
  [476501e8] SLEEFPirates v0.6.42
  [0bca4576] SciMLBase v2.38.0
  [c0aeaf25] SciMLOperators v0.3.8
  [53ae85a6] SciMLStructures v1.2.0
  [6c6a2e73] Scratch v1.2.1
  [efcf1570] Setfield v1.1.1
  [992d4aef] Showoff v1.0.3
  [777ac1f9] SimpleBufferStream v1.1.0
  [727e6d20] SimpleNonlinearSolve v1.8.0
  [699a6c99] SimpleTraits v0.9.4
  [ce78b400] SimpleUnPack v1.1.0
  [a2af1166] SortingAlgorithms v1.2.1
⌃ [47a9eef4] SparseDiffTools v2.18.0
  [e56a9233] Sparspak v0.3.9
  [276daf66] SpecialFunctions v2.4.0
  [aedffcd0] Static v0.8.10
  [0d7ed370] StaticArrayInterface v1.5.0
  [90137ffa] StaticArrays v1.9.4
  [1e83bf80] StaticArraysCore v1.4.2
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.3
  [4c63d2b9] StatsFuns v1.3.1
⌃ [9672c7b4] SteadyStateDiffEq v2.0.1
  [789caeaf] StochasticDiffEq v6.65.1
  [7792a7ef] StrideArraysCore v0.5.6
  [c3572dad] Sundials v4.24.0
  [2efcf032] SymbolicIndexingInterface v0.3.21
  [19f23fe9] SymbolicLimits v0.2.0
  [d1185830] SymbolicUtils v1.6.0
  [0c5d862f] Symbolics v5.28.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.11.1
  [62fd8b95] TensorCore v0.1.1
  [8ea1fca8] TermInterface v0.4.1
  [8290d209] ThreadingUtilities v0.5.2
  [a759f4b9] TimerOutputs v0.5.24
  [0796e94c] Tokenize v0.5.29
  [3bb67fe8] TranscodingStreams v0.10.8
  [d5829a12] TriangularSolve v0.2.0
  [410a4b4d] Tricks v0.1.8
  [781d530d] TruncatedStacktraces v1.4.0
  [5c2747f8] URIs v1.5.1
  [3a884ed6] UnPack v1.0.2
  [1cfade01] UnicodeFun v0.4.1
  [1986cc42] Unitful v1.20.0
  [45397f5d] UnitfulLatexify v1.6.3
  [a7c27f48] Unityper v0.1.6
  [41fe7b60] Unzip v0.2.0
  [3d5dd08c] VectorizationBase v0.21.67
  [19fa3120] VertexSafeGraphs v0.2.0
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  [aacddb02] JpegTurbo_jll v3.0.3+0
  [c1c5ebd0] LAME_jll v3.100.2+0
⌅ [88015f11] LERC_jll v3.0.0+1
  [1d63c593] LLVMOpenMP_jll v15.0.7+0
  [dd4b983a] LZO_jll v2.10.2+0
⌅ [e9f186c6] Libffi_jll v3.2.2+1
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  [7e76a0d4] Libglvnd_jll v1.6.0+0
  [7add5ba3] Libgpg_error_jll v1.49.0+0
  [94ce4f54] Libiconv_jll v1.17.0+0
  [4b2f31a3] Libmount_jll v2.40.1+0
⌅ [89763e89] Libtiff_jll v4.5.1+1
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  [856f044c] MKL_jll v2024.1.0+0
  [e7412a2a] Ogg_jll v1.3.5+1
  [458c3c95] OpenSSL_jll v3.0.13+1
  [efe28fd5] OpenSpecFun_jll v0.5.5+0
  [91d4177d] Opus_jll v1.3.2+0
  [30392449] Pixman_jll v0.43.4+0
⌅ [c0090381] Qt6Base_jll v6.5.3+1
  [f50d1b31] Rmath_jll v0.4.2+0
⌅ [fb77eaff] Sundials_jll v5.2.2+0
  [a44049a8] Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] Wayland_jll v1.21.0+1
  [2381bf8a] Wayland_protocols_jll v1.31.0+0
  [02c8fc9c] XML2_jll v2.12.7+0
  [aed1982a] XSLT_jll v1.1.34+0
  [ffd25f8a] XZ_jll v5.4.6+0
  [f67eecfb] Xorg_libICE_jll v1.1.1+0
  [c834827a] Xorg_libSM_jll v1.2.4+0
  [4f6342f7] Xorg_libX11_jll v1.8.6+0
  [0c0b7dd1] Xorg_libXau_jll v1.0.11+0
  [935fb764] Xorg_libXcursor_jll v1.2.0+4
  [a3789734] Xorg_libXdmcp_jll v1.1.4+0
  [1082639a] Xorg_libXext_jll v1.3.6+0
  [d091e8ba] Xorg_libXfixes_jll v5.0.3+4
  [a51aa0fd] Xorg_libXi_jll v1.7.10+4
  [d1454406] Xorg_libXinerama_jll v1.1.4+4
  [ec84b674] Xorg_libXrandr_jll v1.5.2+4
  [ea2f1a96] Xorg_libXrender_jll v0.9.11+0
  [14d82f49] Xorg_libpthread_stubs_jll v0.1.1+0
  [c7cfdc94] Xorg_libxcb_jll v1.15.0+0
  [cc61e674] Xorg_libxkbfile_jll v1.1.2+0
  [e920d4aa] Xorg_xcb_util_cursor_jll v0.1.4+0
  [12413925] Xorg_xcb_util_image_jll v0.4.0+1
  [2def613f] Xorg_xcb_util_jll v0.4.0+1
  [975044d2] Xorg_xcb_util_keysyms_jll v0.4.0+1
  [0d47668e] Xorg_xcb_util_renderutil_jll v0.3.9+1
  [c22f9ab0] Xorg_xcb_util_wm_jll v0.4.1+1
  [35661453] Xorg_xkbcomp_jll v1.4.6+0
  [33bec58e] Xorg_xkeyboard_config_jll v2.39.0+0
  [c5fb5394] Xorg_xtrans_jll v1.5.0+0
  [3161d3a3] Zstd_jll v1.5.6+0
  [35ca27e7] eudev_jll v3.2.9+0
⌅ [214eeab7] fzf_jll v0.43.0+0
  [1a1c6b14] gperf_jll v3.1.1+0
  [a4ae2306] libaom_jll v3.9.0+0
  [0ac62f75] libass_jll v0.15.1+0
  [2db6ffa8] libevdev_jll v1.11.0+0
  [f638f0a6] libfdk_aac_jll v2.0.2+0
  [36db933b] libinput_jll v1.18.0+0
  [b53b4c65] libpng_jll v1.6.43+1
  [f27f6e37] libvorbis_jll v1.3.7+1
  [009596ad] mtdev_jll v1.1.6+0
  [1317d2d5] oneTBB_jll v2021.12.0+0
  [1270edf5] x264_jll v2021.5.5+0
  [dfaa095f] x265_jll v3.5.0+0
  [d8fb68d0] xkbcommon_jll v1.4.1+1
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  [9fa8497b] Future
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Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

(@v1.10) pkg>

However when I try to run the old script it stops Julia with the following message:

julia> include("cbtest3.jl")

Please submit a bug report with steps to reproduce this fault, and any error messages that follow (in their entirety). Thanks.
...
I will submit it in another post due to size limitation.
11

First half of the error message.

julia> include("cbtest3.jl")

Please submit a bug report with steps to reproduce this fault, and any error messages that follow (in their entirety). Thanks.
Exception: EXCEPTION_ACCESS_VIOLATION at 0x7ffcad64845f -- gc_setmark_pool_ at C:/workdir/src\gc.c:876 [inlined]
gc_setmark_pool at C:/workdir/src\gc.c:895 [inlined]
gc_setmark at C:/workdir/src\gc.c:902 [inlined]
gc_setmark at C:/workdir/src\gc.c:898 [inlined]
gc_mark_outrefs at C:/workdir/src\gc.c:2617 [inlined]
gc_mark_loop_serial_ at C:/workdir/src\gc.c:2690
in expression starting at c:\Projects\protk\cbtest3.jl:17
gc_setmark_pool_ at C:/workdir/src\gc.c:876 [inlined]
gc_setmark_pool at C:/workdir/src\gc.c:895 [inlined]
gc_setmark at C:/workdir/src\gc.c:902 [inlined]
gc_setmark at C:/workdir/src\gc.c:898 [inlined]
gc_mark_outrefs at C:/workdir/src\gc.c:2617 [inlined]
gc_mark_loop_serial_ at C:/workdir/src\gc.c:2690
gc_mark_loop_serial at C:/workdir/src\gc.c:2713
gc_mark_loop at C:/workdir/src\gc.c:2894 [inlined]
_jl_gc_collect at C:/workdir/src\gc.c:3227
ijl_gc_collect at C:/workdir/src\gc.c:3524
maybe_collect at C:/workdir/src\gc.c:937 [inlined]
jl_gc_pool_alloc_inner at C:/workdir/src\gc.c:1293 [inlined]
ijl_gc_pool_alloc at C:/workdir/src\gc.c:1341
LineInfoNode at .\boot.jl:424 [inlined]
ir_inline_linetable! at .\compiler/ssair\inlining.jl:342
ir_prepare_inlining! at .\compiler/ssair\inlining.jl:365
ir_inline_item! at .\compiler/ssair\inlining.jl:397
batch_inline! at .\compiler/ssair\inlining.jl:710
ssa_inlining_pass! at .\compiler/ssair\inlining.jl:81 [inlined]
run_passes at .\compiler\optimize.jl:489
run_passes at .\compiler\optimize.jl:504 [inlined]
optimize at .\compiler\optimize.jl:453 [inlined]
_typeinf at .\compiler\typeinfer.jl:272
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2889
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_ext at .\compiler\typeinfer.jl:1051
typeinf_ext_toplevel at .\compiler\typeinfer.jl:1082
typeinf_ext_toplevel at .\compiler\typeinfer.jl:1078
jfptr_typeinf_ext_toplevel_38978.1 at C:\Users\valer\.julia\juliaup\julia-1.10.3+0.x64.w64.mingw32\lib\julia\sys.dll (unknown line)
_jl_invoke at C:/workdir/src\gf.c:2895 [inlined]
ijl_apply_generic at C:/workdir/src\gf.c:3077 [inlined]
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_type_infer at C:/workdir/src\gf.c:394
jl_generate_fptr_impl at C:/workdir/src\jitlayers.cpp:504
jl_compile_method_internal at C:/workdir/src\gf.c:2481
jl_compile_method_internal at C:/workdir/src\gf.c:2372 [inlined]
_jl_invoke at C:/workdir/src\gf.c:2887 [inlined]
ijl_apply_generic at C:/workdir/src\gf.c:3077
GeneratedFunctionStub at .\boot.jl:602
jl_call_staged at C:/workdir/src\method.c:540
ijl_code_for_staged at C:/workdir/src\method.c:593
get_staged at .\compiler\utilities.jl:123
retrieve_code_info at .\compiler\utilities.jl:135 [inlined]
InferenceState at .\compiler\inferencestate.jl:430
const_prop_call at .\compiler\abstractinterpretation.jl:1201
abstract_call_method_with_const_args at .\compiler\abstractinterpretation.jl:818
abstract_call_method_with_const_args at .\compiler\abstractinterpretation.jl:788
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:103
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
const_prop_call at .\compiler\abstractinterpretation.jl:1207
abstract_call_method_with_const_args at .\compiler\abstractinterpretation.jl:818
abstract_call_method_with_const_args at .\compiler\abstractinterpretation.jl:788
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:103
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2889
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
12

Second half

abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2889
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2889
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_edge at .\compiler\typeinfer.jl:930
abstract_call_method at .\compiler\abstractinterpretation.jl:629
abstract_call_gf_by_type at .\compiler\abstractinterpretation.jl:95
abstract_call_known at .\compiler\abstractinterpretation.jl:2087
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_apply at .\compiler\abstractinterpretation.jl:1612
abstract_call_known at .\compiler\abstractinterpretation.jl:2004
abstract_call at .\compiler\abstractinterpretation.jl:2169
abstract_call at .\compiler\abstractinterpretation.jl:2162
abstract_call at .\compiler\abstractinterpretation.jl:2354
abstract_eval_call at .\compiler\abstractinterpretation.jl:2370
abstract_eval_statement_expr at .\compiler\abstractinterpretation.jl:2380
abstract_eval_statement at .\compiler\abstractinterpretation.jl:2624
abstract_eval_basic_statement at .\compiler\abstractinterpretation.jl:2913
typeinf_local at .\compiler\abstractinterpretation.jl:3098
typeinf_nocycle at .\compiler\abstractinterpretation.jl:3186
_typeinf at .\compiler\typeinfer.jl:247
typeinf at .\compiler\typeinfer.jl:216
typeinf_ext at .\compiler\typeinfer.jl:1051
typeinf_ext_toplevel at .\compiler\typeinfer.jl:1082
typeinf_ext_toplevel at .\compiler\typeinfer.jl:1078
jfptr_typeinf_ext_toplevel_38978.1 at C:\Users\valer\.julia\juliaup\julia-1.10.3+0.x64.w64.mingw32\lib\julia\sys.dll (unknown line)
_jl_invoke at C:/workdir/src\gf.c:2895 [inlined]
ijl_apply_generic at C:/workdir/src\gf.c:3077 [inlined]
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_type_infer at C:/workdir/src\gf.c:394
jl_generate_fptr_impl at C:/workdir/src\jitlayers.cpp:504
jl_compile_method_internal at C:/workdir/src\gf.c:2481
jl_compile_method_internal at C:/workdir/src\gf.c:2372 [inlined]
_jl_invoke at C:/workdir/src\gf.c:2887 [inlined]
ijl_apply_generic at C:/workdir/src\gf.c:3077
#__solve#1 at C:\Users\valer\.julia\packages\DifferentialEquations\zEcqZ\src\default_solve.jl:14
__solve at C:\Users\valer\.julia\packages\DifferentialEquations\zEcqZ\src\default_solve.jl:1 [inlined]
#__solve#72 at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:1394 [inlined]
__solve at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:1386 [inlined]
#solve_call#44 at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:612 [inlined]
solve_call at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:569 [inlined]
#solve_up#53 at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:1072 [inlined]
solve_up at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:1066 [inlined]
#solve#51 at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:1003
solve at C:\Users\valer\.julia\packages\DiffEqBase\yM6LF\src\solve.jl:993
unknown function (ip: 0000017f8cb174bf)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
include_string at .\loading.jl:2076
_include at .\loading.jl:2136
include at .\client.jl:489
unknown function (ip: 0000017f8ca94acb)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
do_call at C:/workdir/src\interpreter.c:126
eval_value at C:/workdir/src\interpreter.c:223
eval_stmt_value at C:/workdir/src\interpreter.c:174 [inlined]
eval_body at C:/workdir/src\interpreter.c:635
jl_interpret_toplevel_thunk at C:/workdir/src\interpreter.c:775
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:934
jl_toplevel_eval_flex at C:/workdir/src\toplevel.c:877
ijl_toplevel_eval at C:/workdir/src\toplevel.c:943 [inlined]
ijl_toplevel_eval_in at C:/workdir/src\toplevel.c:985
eval at .\boot.jl:385 [inlined]
eval_user_input at C:\workdir\usr\share\julia\stdlib\v1.10\REPL\src\REPL.jl:150
repl_backend_loop at C:\workdir\usr\share\julia\stdlib\v1.10\REPL\src\REPL.jl:246
#start_repl_backend#46 at C:\workdir\usr\share\julia\stdlib\v1.10\REPL\src\REPL.jl:231
start_repl_backend at C:\workdir\usr\share\julia\stdlib\v1.10\REPL\src\REPL.jl:228
#run_repl#59 at C:\workdir\usr\share\julia\stdlib\v1.10\REPL\src\REPL.jl:389
run_repl at C:\workdir\usr\share\julia\stdlib\v1.10\REPL\src\REPL.jl:375
jfptr_run_repl_95782.1 at C:\Users\valer\.julia\juliaup\julia-1.10.3+0.x64.w64.mingw32\lib\julia\sys.dll (unknown line)
#1013 at .\client.jl:432
jfptr_YY.1013_86557.1 at C:\Users\valer\.julia\juliaup\julia-1.10.3+0.x64.w64.mingw32\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
jl_f__call_latest at C:/workdir/src\builtins.c:812
#invokelatest#2 at .\essentials.jl:892 [inlined]
invokelatest at .\essentials.jl:889 [inlined]
run_main_repl at .\client.jl:416
exec_options at .\client.jl:333
_start at .\client.jl:552
jfptr__start_86582.1 at C:\Users\valer\.julia\juliaup\julia-1.10.3+0.x64.w64.mingw32\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
true_main at C:/workdir/src\jlapi.c:582
jl_repl_entrypoint at C:/workdir/src\jlapi.c:731
mainCRTStartup at C:/workdir/cli\loader_exe.c:58
BaseThreadInitThunk at C:\Windows\System32\KERNEL32.DLL (unknown line)
RtlUserThreadStart at C:\Windows\SYSTEM32\ntdll.dll (unknown line)
Allocations: 29610000 (Pool: 29587786; Big: 22214); GC: 32
13

Are you the same person that reported this here?

I use Windows and couldn’t reproduce this crash.

14

No I am not, but t he error seems quite similar if not the same. It is triggered during the call to solve the ODEproblem.

It is strange - I completely removed Julia from my Windows 10 computer, delete all packages (.julia folder), installed a fresh copy of Julia 1.10.3 and try to install ModelingToolkit. It installs and precompiles 222/223 packages but it is stuck for 5 hours on the last one which happens to be the ModelingToolkit.

15

I know this is not a direct solution to your problem, but do you have access to WSL2 on your windows machine? WSL2 gives you a virtual linux environment – and personally I find developing/writing code in the Linux environment far more manageable.

Also, the ModellingToolkit library does take some time to precompile, but it’s certainly not hours.

16

I’ve gotten 6 reports of this segfault in the last 24 hours. I cannot reproduce it though. But all of the reports seem to be on Windows. I am seeing if the Julia dev team can help investigate. Could you try Julia v1.10.2 and see if it goes away? One variable that recently changed is the release of Julia v1.10.3 and we know there was an issue that effected StructuralIdentifiability.jl, maybe it’s more stochastic than we knew.

17

In Julia 1.10. 3 I installed ModelingToolkit first (latest version) then installed Catalyst got lots of warnings but when it finished and tried to run the example in this post I got the segfault.

I went back to 1.9.4 installed latest versions the packages and nor more segfault. I also figured out that instead of:

affect!(integrator) = integrator[:k] = 5.0

I can use

affect!(integrator) = setp(integrator.f.sys, :k)(integrator, 0.5)

which works assuming I include

using SymbolicIndexingInterface

None of the integrator.ps[:k] or integrator.ps[rn.k] work though.

Following your post I installed Julia 1.10.2. Added Catalyst which installed Catalyst v13.1.0 not the latest 13.5.1. Then added DifferentialEquations and run the same script and the segfault is back . Tried to update Catalyst then run the script and segfault is back.

Please see below two sessions one in 1.10.2 and the next in 1.9.4 with the package versions installed. I am truncating the error messages - keep the beginning and the end.

Windows PowerShell
Copyright (C) Microsoft Corporation. All rights reserved.

Install the latest PowerShell for new features and improvements! https://aka.ms/PSWindows

PS C:\Users\valer> julia +1.10.2
               _
   _       _ _(_)_     |  Documentation: https://docs.julialang.org
  (_)     | (_) (_)    |
   _ _   _| |_  __ _   |  Type "?" for help, "]?" for Pkg help.
  | | | | | | |/ _` |  |
  | | |_| | | | (_| |  |  Version 1.10.2 (2024-03-01)
 _/ |\__'_|_|_|\__'_|  |  Official https://julialang.org/ release
|__/                   |

(@v1.10) pkg> st
Status `C:\Users\valer\.julia\environments\v1.10\Project.toml`
  [479239e8] Catalyst v13.5.1
  [0c46a032] DifferentialEquations v7.13.0
  [91a5bcdd] Plots v1.40.4

(@v1.10) pkg> ^C

julia> cd("c:\\Projects\\JT\\")

julia> include("cbtest3.jl")
Precompiling Catalyst
        Info Given Catalyst was explicitly requested, output will be shown live
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.→ NonlinearSolveSymbolicsExt
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.talyst
  ? Symbolics
  ? SparseDiffTools → SparseDiffToolsSymbolicsExt
  ? NonlinearSolve → NonlinearSolveSymbolicsExt
  ? ModelingToolkit
  ? Catalyst
[ Info: Precompiling Catalyst [479239e8-5488-4da2-87a7-35f2df7eef83]
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
[ Info: Skipping precompilation since __precompile__(false). Importing Catalyst [479239e8-5488-4da2-87a7-35f2df7eef83].
Precompiling ModelingToolkit
        Info Given ModelingToolkit was explicitly requested, output will be shown live
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.→ NonlinearSolveSymbolicsExt
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
  ? Symbolics
  ? SparseDiffTools → SparseDiffToolsSymbolicsExt
  ? NonlinearSolve → NonlinearSolveSymbolicsExt
  ? ModelingToolkit
[ Info: Precompiling ModelingToolkit [961ee093-0014-501f-94e3-6117800e7a78]
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
[ Info: Skipping precompilation since __precompile__(false). Importing ModelingToolkit [961ee093-0014-501f-94e3-6117800e7a78].
Precompiling Symbolics
        Info Given Symbolics was explicitly requested, output will be shown live
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
  ? Symbolics
[ Info: Precompiling Symbolics [0c5d862f-8b57-4792-8d23-62f2024744c7]
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
[ Info: Skipping precompilation since __precompile__(false). Importing Symbolics [0c5d862f-8b57-4792-8d23-62f2024744c7].
Precompiling SparseDiffToolsSymbolicsExt
        Info Given SparseDiffToolsSymbolicsExt was explicitly requested, output will be shown live
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
  ? Symbolics
  ? SparseDiffTools → SparseDiffToolsSymbolicsExt
[ Info: Precompiling SparseDiffToolsSymbolicsExt [cd430d6f-1330-5ba3-8763-ae950e38ad4f]
┌ Warning: Module Symbolics with build ID ffffffff-ffff-ffff-0000-1f31c3e185af is missing from the cache.
│ This may mean Symbolics [0c5d862f-8b57-4792-8d23-62f2024744c7] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing SparseDiffToolsSymbolicsExt [cd430d6f-1330-5ba3-8763-ae950e38ad4f].
Precompiling NonlinearSolveSymbolicsExt
        Info Given NonlinearSolveSymbolicsExt was explicitly requested, output will be shown live
WARNING: Method definition getname(Symbol) in module SymbolicIndexingInterface at C:\Users\valer\.julia\packages\SymbolicIndexingInterface\SzZz3\src\trait.jl:64 overwritten in module Symbolics at C:\Users\valer\.julia\packages\Symbolics\OrNx6\src\wrapper-types.jl:20.→ NonlinearSolveSymbolicsExt
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
  ? Symbolics
  ? SparseDiffTools → SparseDiffToolsSymbolicsExt
  ? NonlinearSolve → NonlinearSolveSymbolicsExt
[ Info: Precompiling NonlinearSolveSymbolicsExt [45535edf-8919-5fe0-85bd-21cd5b69538c]
┌ Warning: Module Symbolics with build ID ffffffff-ffff-ffff-0000-1f31c3e185af is missing from the cache.
│ This may mean Symbolics [0c5d862f-8b57-4792-8d23-62f2024744c7] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing NonlinearSolveSymbolicsExt [45535edf-8919-5fe0-85bd-21cd5b69538c].

Please submit a bug report with steps to reproduce this fault, and any error messages that follow (in their entirety). Thanks.
Exception: EXCEPTION_ACCESS_VIOLATION at 0x7ff92bd08610 -- gc_setmark_pool_ at C:/workdir/src\gc.c:876 [inlined]
gc_setmark_pool at C:/workdir/src\gc.c:895 [inlined]
gc_setmark at C:/workdir/src\gc.c:902 [inlined]
gc_setmark at C:/workdir/src\gc.c:898 [inlined]
gc_mark_outrefs at C:/workdir/src\gc.c:2617 [inlined]
gc_mark_loop_serial_ at C:/workdir/src\gc.c:2690
in expression starting at c:\Projects\JT\cbtest3.jl:19
gc_setmark_pool_ at C:/workdir/src\gc.c:876 [inlined]
.................
run_main_repl at .\client.jl:416
exec_options at .\client.jl:333
_start at .\client.jl:552
jfptr__start_86593.1 at C:\Users\valer\.julia\juliaup\julia-1.10.2+0.x64.w64.mingw32\lib\julia\sys.dll (unknown line)
jl_apply at C:/workdir/src\julia.h:1982 [inlined]
true_main at C:/workdir/src\jlapi.c:582
jl_repl_entrypoint at C:/workdir/src\jlapi.c:731
mainCRTStartup at C:/workdir/cli\loader_exe.c:58
BaseThreadInitThunk at C:\Windows\System32\KERNEL32.DLL (unknown line)
RtlUserThreadStart at C:\Windows\SYSTEM32\ntdll.dll (unknown line)
Allocations: 88082371 (Pool: 88005833; Big: 76538); GC: 91

and in 1.9.4

Windows PowerShell
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PS C:\Users\valer> julia +1.9.4
               _
   _       _ _(_)_     |  Documentation: https://docs.julialang.org
  (_)     | (_) (_)    |
   _ _   _| |_  __ _   |  Type "?" for help, "]?" for Pkg help.
  | | | | | | |/ _` |  |
  | | |_| | | | (_| |  |  Version 1.9.4 (2023-11-14)
 _/ |\__'_|_|_|\__'_|  |  Official https://julialang.org/ release
|__/                   |

(@v1.9) pkg> st
Status `C:\Users\valer\.julia\environments\v1.9\Project.toml`
  [479239e8] Catalyst v13.5.1
  [0c46a032] DifferentialEquations v7.13.0
  [91a5bcdd] Plots v1.40.4
⌅ [2efcf032] SymbolicIndexingInterface v0.3.1
Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated`

(@v1.9) pkg> ^C

julia> cd("c:\\Projects\\JT\\")

julia> include("cbtest3.jl")
ERROR: LoadError: Parameter indexing is deprecated. Use `setp(sys, k)(integrator, 5.0)` to set parameter value.
Stacktrace:
  [1] error(s::String)
    @ Base .\error.jl:35
  [2] setindex!(A::OrdinaryDiffEq.ODEIntegrator{CompositeAlgorithm{Tuple{Tsit5{typeof(OrdinaryDiffEq.trivial_limiter!), typeof(OrdinaryDiffEq.trivial_limiter!), Static.False}, Rosenbrock23{1, false, Nothing, typeof(OrdinaryDiffEq.DEFAULT_PRE 
............
    @ DiffEqBase C:\Users\valer\.julia\packages\DiffEqBase\eTCPy\src\solve.jl:980
 [26] top-level scope
    @ c:\Projects\JT\cbtest3.jl:19
 [27] include(fname::String)
    @ Base.MainInclude .\client.jl:478
 [28] top-level scope
    @ REPL[3]:1
in expression starting at c:\Projects\JT\cbtest3.jl:19