Revise warnings on v1.10.1

General Usage
1

I’m trying to use DSP and Plots together on v1.10.1, but I’m encountering many warnings from Revise when trying to install these. Are these serious, and how do I resolve these?

(@v1.10) pkg> activate --temp
  Activating new project at `/tmp/jl_U8Fakd`

julia> using DSP
 │ Package DSP not found, but a package named DSP is available from a registry. 
 │ Install package?
 │   (jl_U8Fakd) pkg> add DSP 
 └ (y/n/o) [y]: 
   Resolving package versions...
    Updating `/tmp/jl_U8Fakd/Project.toml`
  [717857b8] + DSP v0.7.9
    Updating `/tmp/jl_U8Fakd/Manifest.toml`
  [621f4979] + AbstractFFTs v1.5.0
  [34da2185] + Compat v4.12.0
  [187b0558] + ConstructionBase v1.5.4
  [717857b8] + DSP v0.7.9
  [ffbed154] + DocStringExtensions v0.9.3
  [7a1cc6ca] + FFTW v1.8.0
  [92d709cd] + IrrationalConstants v0.2.2
  [c8e1da08] + IterTools v1.10.0
  [692b3bcd] + JLLWrappers v1.5.0
  [2ab3a3ac] + LogExpFunctions v0.3.26
  [1914dd2f] + MacroTools v0.5.13
  [f27b6e38] + Polynomials v4.0.6
  [aea7be01] + PrecompileTools v1.2.0
  [21216c6a] + Preferences v1.4.1
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [efcf1570] + Setfield v1.1.1
  [276daf66] + SpecialFunctions v2.3.1
  [1e83bf80] + StaticArraysCore v1.4.2
  [f5851436] + FFTW_jll v3.3.10+0
  [1d5cc7b8] + IntelOpenMP_jll v2024.0.2+0
  [856f044c] + MKL_jll v2024.0.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.5+0
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [4af54fe1] + LazyArtifacts
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.0+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.1+2
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.8.0+1
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2

julia> using Plots
 │ Package Plots not found, but a package named Plots is available from a registry. 
 │ Install package?
 │   (jl_U8Fakd) pkg> add Plots 
 └ (y/n/o) [y]: 
   Resolving package versions...
    Updating `/tmp/jl_U8Fakd/Project.toml`
  [91a5bcdd] + Plots v1.40.1
    Updating `/tmp/jl_U8Fakd/Manifest.toml`
  [d1d4a3ce] + BitFlags v0.1.8
  [944b1d66] + CodecZlib v0.7.4
  [35d6a980] + ColorSchemes v3.24.0
  [3da002f7] + ColorTypes v0.11.4
  [c3611d14] + ColorVectorSpace v0.10.0
  [5ae59095] + Colors v0.12.10
  [f0e56b4a] + ConcurrentUtilities v2.3.1
  [d38c429a] + Contour v0.6.2
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.16
  [8bb1440f] + DelimitedFiles v1.9.1
  [460bff9d] + ExceptionUnwrapping v0.1.10
  [c87230d0] + FFMPEG v0.4.1
  [53c48c17] + FixedPointNumbers v0.8.4
  [59287772] + Formatting v0.4.2
  [28b8d3ca] + GR v0.73.2
  [42e2da0e] + Grisu v1.0.2
  [cd3eb016] + HTTP v1.10.1
  [1019f520] + JLFzf v0.1.7
  [682c06a0] + JSON v0.21.4
  [b964fa9f] + LaTeXStrings v1.3.1
  [23fbe1c1] + Latexify v0.16.1
  [e6f89c97] + LoggingExtras v1.0.3
  [739be429] + MbedTLS v1.1.9
  [442fdcdd] + Measures v0.3.2
  [e1d29d7a] + Missings v1.1.0
  [77ba4419] + NaNMath v1.0.2
  [4d8831e6] + OpenSSL v1.4.1
  [bac558e1] + OrderedCollections v1.6.3
  [69de0a69] + Parsers v2.8.1
  [b98c9c47] + Pipe v1.3.0
  [ccf2f8ad] + PlotThemes v3.1.0
  [995b91a9] + PlotUtils v1.4.0
  [91a5bcdd] + Plots v1.40.1
  [01d81517] + RecipesPipeline v0.6.12
  [05181044] + RelocatableFolders v1.0.1
  [ae029012] + Requires v1.3.0
  [6c6a2e73] + Scratch v1.2.1
  [992d4aef] + Showoff v1.0.3
  [777ac1f9] + SimpleBufferStream v1.1.0
  [a2af1166] + SortingAlgorithms v1.2.1
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.2
  [62fd8b95] + TensorCore v0.1.1
  [3bb67fe8] + TranscodingStreams v0.10.3
  [5c2747f8] + URIs v1.5.1
  [1cfade01] + UnicodeFun v0.4.1
  [1986cc42] + Unitful v1.19.0
  [45397f5d] + UnitfulLatexify v1.6.3
  [41fe7b60] + Unzip v0.2.0
  [6e34b625] + Bzip2_jll v1.0.8+1
  [83423d85] + Cairo_jll v1.16.1+1
  [2702e6a9] + EpollShim_jll v0.0.20230411+0
  [2e619515] + Expat_jll v2.5.0+0
  [b22a6f82] + FFMPEG_jll v4.4.4+1
  [a3f928ae] + Fontconfig_jll v2.13.93+0
  [d7e528f0] + FreeType2_jll v2.13.1+0
  [559328eb] + FriBidi_jll v1.0.10+0
  [0656b61e] + GLFW_jll v3.3.9+0
  [d2c73de3] + GR_jll v0.73.2+0
  [78b55507] + Gettext_jll v0.21.0+0
  [7746bdde] + Glib_jll v2.76.5+0
  [3b182d85] + Graphite2_jll v1.3.14+0
  [2e76f6c2] + HarfBuzz_jll v2.8.1+1
  [aacddb02] + JpegTurbo_jll v3.0.1+0
  [c1c5ebd0] + LAME_jll v3.100.1+0
  [88015f11] + LERC_jll v3.0.0+1
  [1d63c593] + LLVMOpenMP_jll v15.0.7+0
  [dd4b983a] + LZO_jll v2.10.1+0
⌅ [e9f186c6] + Libffi_jll v3.2.2+1
  [d4300ac3] + Libgcrypt_jll v1.8.7+0
  [7e76a0d4] + Libglvnd_jll v1.6.0+0
  [7add5ba3] + Libgpg_error_jll v1.42.0+0
  [94ce4f54] + Libiconv_jll v1.17.0+0
  [4b2f31a3] + Libmount_jll v2.35.0+0
⌅ [89763e89] + Libtiff_jll v4.5.1+1
  [38a345b3] + Libuuid_jll v2.36.0+0
  [e7412a2a] + Ogg_jll v1.3.5+1
  [458c3c95] + OpenSSL_jll v3.0.13+0
  [91d4177d] + Opus_jll v1.3.2+0
  [30392449] + Pixman_jll v0.42.2+0
  [c0090381] + Qt6Base_jll v6.5.3+1
  [a44049a8] + Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] + Wayland_jll v1.21.0+1
  [2381bf8a] + Wayland_protocols_jll v1.31.0+0
  [02c8fc9c] + XML2_jll v2.12.2+0
  [aed1982a] + XSLT_jll v1.1.34+0
  [ffd25f8a] + XZ_jll v5.4.5+0
  [f67eecfb] + Xorg_libICE_jll v1.0.10+1
  [c834827a] + Xorg_libSM_jll v1.2.3+0
  [4f6342f7] + Xorg_libX11_jll v1.8.6+0
  [0c0b7dd1] + Xorg_libXau_jll v1.0.11+0
  [935fb764] + Xorg_libXcursor_jll v1.2.0+4
  [a3789734] + Xorg_libXdmcp_jll v1.1.4+0
  [1082639a] + Xorg_libXext_jll v1.3.4+4
  [d091e8ba] + Xorg_libXfixes_jll v5.0.3+4
  [a51aa0fd] + Xorg_libXi_jll v1.7.10+4
  [d1454406] + Xorg_libXinerama_jll v1.1.4+4
  [ec84b674] + Xorg_libXrandr_jll v1.5.2+4
  [ea2f1a96] + Xorg_libXrender_jll v0.9.10+4
  [14d82f49] + Xorg_libpthread_stubs_jll v0.1.1+0
  [c7cfdc94] + Xorg_libxcb_jll v1.15.0+0
  [cc61e674] + Xorg_libxkbfile_jll v1.1.2+0
  [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.4+0
  [12413925] + Xorg_xcb_util_image_jll v0.4.0+1
  [2def613f] + Xorg_xcb_util_jll v0.4.0+1
  [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.0+1
  [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.9+1
  [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.1+1
  [35661453] + Xorg_xkbcomp_jll v1.4.6+0
  [33bec58e] + Xorg_xkeyboard_config_jll v2.39.0+0
  [c5fb5394] + Xorg_xtrans_jll v1.5.0+0
  [3161d3a3] + Zstd_jll v1.5.5+0
  [35ca27e7] + eudev_jll v3.2.9+0
  [214eeab7] + fzf_jll v0.43.0+0
  [1a1c6b14] + gperf_jll v3.1.1+0
  [a4ae2306] + libaom_jll v3.4.0+0
  [0ac62f75] + libass_jll v0.15.1+0
  [2db6ffa8] + libevdev_jll v1.11.0+0
  [f638f0a6] + libfdk_aac_jll v2.0.2+0
  [36db933b] + libinput_jll v1.18.0+0
  [b53b4c65] + libpng_jll v1.6.40+0
  [f27f6e37] + libvorbis_jll v1.3.7+1
  [009596ad] + mtdev_jll v1.1.6+0
  [1270edf5] + x264_jll v2021.5.5+0
  [dfaa095f] + x265_jll v3.5.0+0
  [d8fb68d0] + xkbcommon_jll v1.4.1+1
  [a63ad114] + Mmap
  [8dfed614] + Test
  [efcefdf7] + PCRE2_jll v10.42.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /home/jishnu/.julia/juliaup/julia-1.10.1+0.x64.linux.gnu/share/julia/stdlib/v1.10/Statistics/src/Statistics.jl/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /home/jishnu/.julia/juliaup/julia-1.10.1+0.x64.linux.gnu/share/julia/stdlib/v1.10/CompilerSupportLibraries_jll/src/CompilerSupportLibraries_jll.jl/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SuiteSparse_jll/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/lib is not an existing directory, Revise is not watching
└ @ Revise /home/jishnu/.julia/packages/Revise/FaTes/src/packagedef.jl:573
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/SparseArrays.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/higherorderfns.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/umfpack.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/cholmod.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/spqr.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /home/jishnu/.julia/juliaup/julia-1.10.1+0.x64.linux.gnu/share/julia/stdlib/v1.10/CompilerSupportLibraries_jll/src/CompilerSupportLibraries_jll.jl/src/CompilerSupportLibraries_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src/OpenLibm_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SuiteSparse_jll/src/SuiteSparse_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/readonly.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/abstractsparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsematrix.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparseconvert.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsevector.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/linalg.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/deprecated.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/LibSuiteSparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/lib/x86_64-linux-gnu.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /home/jishnu/.julia/juliaup/julia-1.10.1+0.x64.linux.gnu/share/julia/stdlib/v1.10/Statistics/src/Statistics.jl/src/Statistics.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
3 Likes
2

ı have just upgraded to 1.10.1 and I do not receive those warnings. However, I installed DSP specificially for your post. Revise is loaded in my startup.jl. Could you remove DSP including the directory at ~/.julia/packages/DSP, garbage collect and reinstall the package?

3

Strangely, these persist even after deleting the package directories for DSP, Plots and Revise

4

Have you tried deleting and rebuilding the Manifest.toml file in

.julia/environments/v1.10
2 Likes
5

I’m seeing similar warnings, after updating to 1.10.1. For example:

julia> ┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src is not an existing directory, Revise is not watching

The strange thing about these paths, is that it seems the $HOME directory here is wrong, /Users/julia does not exist because it’s missing the username. Is this alright?

More warnings like these:

julia> Revise.retry()
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Test/src/precompile.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Zlib_jll/src/Zlib_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SuiteSparse_jll/src/SuiteSparse_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparseconvert.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/linalg.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/deprecated.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Test/src/logging.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/SparseArrays.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/readonly.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/abstractsparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsematrix.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsevector.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/higherorderfns.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/LibSuiteSparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/lib/aarch64-apple-darwin20.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/umfpack.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/cholmod.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Test/src/Test.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: ~/.julia/juliaup/julia-1.10.1+0.aarch64.apple.darwin14/share/julia/stdlib/v1.10/Statistics/src/Statistics.jl/src/Statistics.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: ~/.julia/juliaup/julia-1.10.1+0.aarch64.apple.darwin14/share/julia/stdlib/v1.10/SuiteSparse/src/SuiteSparse.jl/src/SuiteSparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: ~/.julia/juliaup/julia-1.10.1+0.aarch64.apple.darwin14/share/julia/stdlib/v1.10/CompilerSupportLibraries_jll/src/CompilerSupportLibraries_jll.jl/src/CompilerSupportLibraries_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/spqr.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src/OpenLibm_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
6

This seems to have resolved itself after I deleted the compiled cache (all of compiled/v1.10). I wish the process were less disruptive.

Edit: spoke too soon. It’s not resolved yet. I still obtain warnings like

julia> plotly()
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SuiteSparse_jll/src/SuiteSparse_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsematrix.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparsevector.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/deprecated.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/LibSuiteSparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/umfpack.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/cholmod.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /home/jishnu/.julia/juliaup/julia-1.10.1+0.x64.linux.gnu/share/julia/stdlib/v1.10/Statistics/src/Statistics.jl/src/Statistics.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /home/jishnu/.julia/juliaup/julia-1.10.1+0.x64.linux.gnu/share/julia/stdlib/v1.10/CompilerSupportLibraries_jll/src/CompilerSupportLibraries_jll.jl/src/CompilerSupportLibraries_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Zlib_jll/src/Zlib_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/SparseArrays.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/sparseconvert.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/linalg.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/lib/x86_64-linux-gnu.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/PCRE2_jll/src/PCRE2_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/readonly.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/abstractsparse.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/higherorderfns.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/spqr.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
┌ Warning: /cache/build/default-maughin-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src/OpenLibm_jll.jl no longer exists, deleted all methods
└ @ Revise ~/.julia/packages/Revise/FaTes/src/packagedef.jl:666
Plots.PlotlyBackend()
7

Similar on a Windows machine. When I look at the directory structure just after performing these commands there is no folder C:\workspace.…

Example errors are

  [efcefdf7] + PCRE2_jll v10.42.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
Precompiling project...
  127 dependencies successfully precompiled in 118 seconds. 39 already precompiled.
┌ Warning: C:\workdir\usr\share\julia\stdlib\v1.10\SparseArrays\src\solvers\lib\x86_64-w64-mingw32.jl no longer exists, deleted all methods
└ @ Revise C:\Users\jakez\.julia\packages\Revise\6FP25\src\packagedef.jl:666
┌ Warning: C:\workdir\usr\share\julia\stdlib\v1.10\OpenLibm_jll\src\OpenLibm_jll.jl no longer exists, deleted all methods
└ @ Revise C:\Users\jakez\.julia\packages\Revise\6FP25\src\packagedef.jl:666
┌ Warning: C:\Users\jakez\AppData\Local\Programs\Julia-1.10.1\share\julia\stdlib\v1.10\CompilerSupportLibraries_jll\src\CompilerSupportLibraries_jll.jl\src\CompilerSupportLibraries_jll.jl no longer exists, deleted all methods
└
8

I get similar messages, also arising from /Users/julia/.julia which does not exist:

julia> ┌ Warning: /Library/Local/Applications/Julia-1.10.app/Contents/Resources/julia/share/julia/stdlib/v1.10/SuiteSparse/src/SuiteSparse.jl/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/LazyArtifacts/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/OpenLibm_jll/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Library/Local/Applications/Julia-1.10.app/Contents/Resources/julia/share/julia/stdlib/v1.10/Statistics/src/Statistics.jl/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Library/Local/Applications/Julia-1.10.app/Contents/Resources/julia/share/julia/stdlib/v1.10/CompilerSupportLibraries_jll/src/CompilerSupportLibraries_jll.jl/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SuiteSparse_jll/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/Zlib_jll/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/PCRE2_jll/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers/lib is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573
┌ Warning: /Users/julia/.julia/scratchspaces/a66863c6-20e8-4ff4-8a62-49f30b1f605e/agent-cache/default-honeycrisp-XG3Q6T6R70.0/build/default-honeycrisp-XG3Q6T6R70-0/julialang/julia-release-1-dot-10/usr/share/julia/stdlib/v1.10/SparseArrays/src/solvers is not an existing directory, Revise is not watching
└ @ Revise /opt/julia/packages/Revise/sCmwS/src/packagedef.jl:573

9

I got the same problem, and did not find how to solve it. I came back to 1.10.0. If someone found a solution, I am interested.
My version info:

julia> versioninfo()
Julia Version 1.10.0
Commit 3120989f39 (2023-12-25 18:01 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Windows (x86_64-w64-mingw32)
  CPU: 16 × Intel(R) Core(TM) i9-10885H CPU @ 2.40GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, skylake)
  Threads: 23 on 16 virtual cores
Environment:
  JULIA_EDITOR = code
10

Same here.

11

Finally, as advised here:

I removed the Manifest.toml file in

.julia/environments/v1.10

and instantiated again. It seems to have solved the problem. Thank you @ ctkelley

EDIT:
Indeed it was not enough. Following:

I also updated Revise.jl (3.5.13 ==> 3.5.14) in the global environment. Thanks @kristoffer.carlsson.

12

I removed Manifest.toml, and did a pkg> up. But I am still seeing the warnings.

Ref: Warnings on Julia v1.10.1 when installing or loading packages · Issue #802 · timholy/Revise.jl · GitHub

I am also experiencing more weird issues, like the deletion of mean described in the last comment of the linked Github issue (though I’m not sure how that’s connected).

13

Workaround issue when internal code loading function gives a path to entry file instead of directory to package by KristofferC · Pull Request #806 · timholy/Revise.jl · GitHub might fix this if people want to try it out

14

Revise 3.5.14 should hopefully fix this.

7 Likes
15

So far seems fixed to me!