Plots stopped working (more or less out of nowhere)

Specific Domains Visualization
,
1

I have an environment which was fine, but after not touching it for a week, suddenly it does no longer work. I haven’t done anything to package versions, so there must be something weirder going on. I have been back and fourth with ChatGPT about it for a while, but nothing actually works.

This is by Julia version:

v"1.10.4"

My environment:

  [717857b8] DSP v0.8.4
  [a93c6f00] DataFrames v1.8.1
  [7806a523] DecisionTree v0.12.4
  [587475ba] Flux v0.16.5
  [add582a8] MLJ v0.21.0
⌃ [a7f614a8] MLJBase v1.9.2
⌃ [c6f25543] MLJDecisionTreeInterface v0.4.2
⌃ [094fc8d1] MLJFlux v0.6.6
  [54119dfa] MLJXGBoostInterface v0.3.13
  [91a5bcdd] Plots v1.41.1
⌅ [08abe8d2] PrettyTables v2.4.0
  [2913bbd2] StatsBase v0.34.8
  [f3b207a7] StatsPlots v0.15.8
  [bd369af6] Tables v1.12.1
  [009559a3] XGBoost v2.5.2
  [9e88b42a] Serialization

when I run

using Plots

I get a

[ Info: Precompiling Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]
ERROR: LoadError: ArgumentError: Platform `riscv64-linux-gnu` is not an officially supported platform
Stacktrace:
 [1] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String; validate_strict::Bool)
   @ Base.BinaryPlatforms ./binaryplatforms.jl:753
 [2] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String)
   @ Base.BinaryPlatforms ./binaryplatforms.jl:671
 [3] (::FFMPEG_jll.var"#parse_wrapper_platform#1")(x::Any)
   @ FFMPEG_jll ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:113
 [4] (::FFMPEG_jll.var"#make_wrapper_dict#2"{FFMPEG_jll.var"#parse_wrapper_platform#1"})(dir::Any, x::Any)
   @ FFMPEG_jll ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:145
 [5] top-level scope
   @ ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:160
 [6] include
   @ ./Base.jl:495 [inlined]
 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:2222
 [8] top-level scope
   @ stdin:3
in expression starting at /home/loman/.julia/packages/FFMPEG_jll/2rhlH/src/FFMPEG_jll.jl:2
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile FFMPEG_jll [b22a6f82-2f65-5046-a5b2-351ab43fb4e5] to "/home/loman/.julia/compiled/v1.10/FFMPEG_jll/jl_idGiHa".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] include
    @ ./Base.jl:495 [inlined]
 [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2222
 [25] top-level scope
    @ stdin:3
in expression starting at /home/loman/.julia/packages/FFMPEG/a6NkO/src/FFMPEG.jl:1
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile FFMPEG [c87230d0-a227-11e9-1b43-d7ebe4e7570a] to "/home/loman/.julia/compiled/v1.10/FFMPEG/jl_bX860t".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] include(mod::Module, _path::String)
    @ Base ./Base.jl:495
 [24] include(x::String)
    @ Plots ~/.julia/packages/Plots/8ZnR3/src/Plots.jl:1
 [25] top-level scope
    @ ~/.julia/packages/Plots/8ZnR3/src/Plots.jl:168
 [26] include
    @ ./Base.jl:495 [inlined]
 [27] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2222
 [28] top-level scope
    @ stdin:3
in expression starting at /home/loman/.julia/packages/Plots/8ZnR3/src/animation.jl:1
in expression starting at /home/loman/.julia/packages/Plots/8ZnR3/src/Plots.jl:1
in expression starting at stdin:3
┌ Warning: failed to remove pidfile on close
│   path = "/mi/share/scratch/loman/.julia/compiled/v1.10/Plots/ld3vC_lxHfi.ji.pidfile"
│   removed = false
└ @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:342
ERROR: Failed to precompile Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80] to "/home/loman/.julia/compiled/v1.10/Plots/jl_x9HyAK".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] top-level scope
    @ none:1

At some point ChatGPT suggested putting

Base.DEPOT_PATH = [joinpath(ENV["HOME"], ".julia")]

in my startup.jl file. However, this caused other problems, and later ChatGPT said this was a really bad idea and I should remove it and things should be able to work anyway.

2

For why you got in this broken state I can’t help, but maybe if you remove the artifacts and compiled code from your .julia you can instantiate again your project properly (remove the .julia/artifacts and .julia/compiled folders). Of course that will trigger precompilation again from scratch.

1 Like
3

Here is an example of a failed attempt to fix it

shell> rm -rf ~/.julia/compiled/v1.10/*
       rm -rf ~/.julia/artifacts/*

julia> using Pkg

julia> Pkg.instantiate()

Precompiling project...
  ✗ MLFlowClient
  ✗ FileIO → HTTPExt
  ✗ OpenML
  ✗ MLJFlow
  ✗ MLJ
  33 dependencies successfully precompiled in 133 seconds. 349 already precompiled.
  3 dependencies had output during precompilation:
┌ PDMats → StatsBaseExt
│  [pid 2795753] waiting for IO to finish:
│   Handle type        uv_handle_t->data
│   timer              0x28e8f7e0->0x70594946e440
│  This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.
└  
┌ MLJBase → DefaultMeasuresExt
│  [pid 2800553] waiting for IO to finish:
│   Handle type        uv_handle_t->data
│   timer              0x12a5ef80->0x7afcf80ce140
│  This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.
└  
┌ Clustering
│  [pid 2795750] waiting for IO to finish:
│   Handle type        uv_handle_t->data
│   timer              0x324e1470->0x749073fab2e0
│  This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.
└  
  5 dependencies errored.
  For a report of the errors see `julia> err`. To retry use `pkg> precompile`

julia> Pkg.build()

julia> using Plots
[ Info: Precompiling Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]
ERROR: LoadError: ArgumentError: Platform `riscv64-linux-gnu` is not an officially supported platform
Stacktrace:
 [1] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String; validate_strict::Bool)
   @ Base.BinaryPlatforms ./binaryplatforms.jl:753
 [2] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String)
   @ Base.BinaryPlatforms ./binaryplatforms.jl:671
 [3] (::FFMPEG_jll.var"#parse_wrapper_platform#1")(x::Any)
   @ FFMPEG_jll ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:113
 [4] (::FFMPEG_jll.var"#make_wrapper_dict#2"{FFMPEG_jll.var"#parse_wrapper_platform#1"})(dir::Any, x::Any)
   @ FFMPEG_jll ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:145
 [5] top-level scope
   @ ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:160
 [6] include
   @ ./Base.jl:495 [inlined]
 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:2222
 [8] top-level scope
   @ stdin:3
in expression starting at /home/loman/.julia/packages/FFMPEG_jll/2rhlH/src/FFMPEG_jll.jl:2
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile FFMPEG_jll [b22a6f82-2f65-5046-a5b2-351ab43fb4e5] to "/home/loman/.julia/compiled/v1.10/FFMPEG_jll/jl_6i5sva".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] include
    @ ./Base.jl:495 [inlined]
 [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2222
 [25] top-level scope
    @ stdin:3
in expression starting at /home/loman/.julia/packages/FFMPEG/a6NkO/src/FFMPEG.jl:1
in expression starting at stdin:3
ERROR: LoadError: Failed to precompile FFMPEG [c87230d0-a227-11e9-1b43-d7ebe4e7570a] to "/home/loman/.julia/compiled/v1.10/FFMPEG/jl_Wa6kNn".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] include(mod::Module, _path::String)
    @ Base ./Base.jl:495
 [24] include(x::String)
    @ Plots ~/.julia/packages/Plots/8ZnR3/src/Plots.jl:1
 [25] top-level scope
    @ ~/.julia/packages/Plots/8ZnR3/src/Plots.jl:168
 [26] include
    @ ./Base.jl:495 [inlined]
 [27] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2222
 [28] top-level scope
    @ stdin:3
in expression starting at /home/loman/.julia/packages/Plots/8ZnR3/src/animation.jl:1
in expression starting at /home/loman/.julia/packages/Plots/8ZnR3/src/Plots.jl:1
in expression starting at stdin:3
ERROR: Failed to precompile Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80] to "/home/loman/.julia/compiled/v1.10/Plots/jl_AKubK2".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)
    @ Base ./loading.jl:2468
  [3] compilecache
    @ ./loading.jl:2340 [inlined]
  [4] (::Base.var"#968#969"{Base.PkgId})()
    @ Base ./loading.jl:1974
  [5] mkpidlock(f::Base.var"#968#969"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:93
  [6] #mkpidlock#6
    @ /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:88 [inlined]
  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /mi/share/scratch/loman/.julia/juliaup/julia-1.10.4+0.x64.linux.gnu/share/julia/stdlib/v1.10/FileWatching/src/pidfile.jl:111
  [8] #invokelatest#2
    @ ./essentials.jl:894 [inlined]
  [9] invokelatest
    @ ./essentials.jl:889 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#968#969"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:2983
 [11] maybe_cachefile_lock
    @ ./loading.jl:2980 [inlined]
 [12] _require(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:1970
 [13] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1812
 [14] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [15] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [16] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:1803
 [17] macro expansion
    @ ./loading.jl:1790 [inlined]
 [18] macro expansion
    @ ./lock.jl:267 [inlined]
 [19] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1753
 [20] #invoke_in_world#3
    @ ./essentials.jl:926 [inlined]
 [21] invoke_in_world
    @ ./essentials.jl:923 [inlined]
 [22] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1746
 [23] top-level scope
    @ none:1

(don’t really understand stuff here very well mys

4

thanks, trying this now

5

Clearly you beat me. rs.

1 Like
6

Please output the result of julia> versioninfo() which will give further information on your system, for others to help.

1 Like
7 
julia> versioninfo()
Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 20 × 13th Gen Intel(R) Core(TM) i5-13500T
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, goldmont)
Threads: 1 default, 0 interactive, 1 GC (on 20 virtual cores)
8

Maybe remove .julia/packages/JLLWrappers ? That’s where the error is occurring.

1 Like
9

I tried a full clean of everything, still no sucess unfortunatley :frowning:

shell> rm -rf ~/.julia/artifacts
       rm -rf ~/.julia/compiled
       rm -rf ~/.julia/packages
       rm -rf ~/.julia/scratchspaces
       rm -rf ~/.julia/registries

rm: cannot remove '/home/loman/.julia/artifacts': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/Tokenize': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/Preferences': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/CommonMark': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/PrecompileTools': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/CompatLinearAlgebraExt': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/VSCodeServer': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/CSTParser': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/JLLWrappers': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/CodeTracking': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/DataStructures': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/Glob': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/Compat': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/OrderedCollections': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/JuliaInterpreter': Directory not empty
rm: cannot remove '/home/loman/.julia/compiled/v1.10/JuliaFormatter': Directory not empty
  Downloaded artifact: Libuuid
  Downloaded artifact: Xorg_xcb_util_renderutil
  Downloaded artifact: Xorg_libICE
  Downloaded artifact: Graphite2
  Downloaded artifact: libass
  Downloaded artifact: Pixman
  Downloaded artifact: Wayland
  Downloaded artifact: Arpack
  Downloaded artifact: Xorg_xtrans
  Downloaded artifact: OpenSSL
  Downloaded artifact: FFMPEG
  Downloaded artifact: Xorg_xkeyboard_config
  Downloaded artifact: LLVMOpenMP
  Downloaded artifact: Xorg_libXrandr
  Downloaded artifact: Xorg_libXfixes
  Downloaded artifact: LAME
  Downloaded artifact: Qt6Wayland
  Downloaded artifact: GettextRuntime
  Downloaded artifact: Libiconv
  Downloaded artifact: Qt6Base
  Downloaded artifact: libvorbis
  Downloaded artifact: Glib
  Downloaded artifact: Libglvnd
  Downloaded artifact: Xorg_libXdmcp
  Downloaded artifact: Xorg_libX11
Precompiling project...
  ✓ Preferences
  ✓ Compat
  ✓ OrderedCollections
  ✓ Compat → CompatLinearAlgebraExt
  ✓ URIs
  ✓ DataStructures
  ✓ Crayons
  ✓ JLLWrappers
  ✓ fzf_jll
  ✓ JLFzf
  ✓ PrecompileTools
  ✓ Parsers
  ✓ JSON
  ✗ FileIO → HTTPExt
  ✗ MLFlowClient
  ✗ OpenML
  ✗ MLJFlow
  ✗ MLJ
  373 dependencies successfully precompiled in 283 seconds. 9 already precompiled.
  13 dependencies precompiled but different versions are currently loaded. Restart julia to access the new versions
  4 dependencies had output during precompilation:
┌ HTTP
│  ┌ Info: Ignoring an error that occurred during the precompilation workload
│  │   exception =
│  │    AssertionError: ret == 1
│  │    Stacktrace:
│  │      [1] OpenSSL.SSLContext(ssl_method::OpenSSL.SSLMethod, verify_file::String)
│  │        @ OpenSSL ~/.julia/packages/OpenSSL/fun1x/src/ssl.jl:165
│  │      [2] SSLContext
│  │        @ ~/.julia/packages/OpenSSL/fun1x/src/ssl.jl:145 [inlined]
│  │      [3] __init__()
│  │        @ HTTP.Connections ~/.julia/packages/HTTP/ShTJs/src/Connections.jl:41
│  │      [4] macro expansion
│  │        @ ~/.julia/packages/HTTP/ShTJs/src/precompile.jl:6 [inlined]
│  │      [5] macro expansion
│  │        @ ~/.julia/packages/PrecompileTools/L8A3n/src/workloads.jl:140 [inlined]
│  │      [6] top-level scope
│  │        @ ~/.julia/packages/HTTP/ShTJs/src/precompile.jl:4
│  │      [7] include(mod::Module, _path::String)
│  │        @ Base ./Base.jl:495
│  │      [8] include
│  │        @ ~/.julia/packages/HTTP/ShTJs/src/HTTP.jl:1 [inlined]
│  │      [9] top-level scope
│  │        @ ~/.julia/packages/HTTP/ShTJs/src/HTTP.jl:643
│  │     [10] include
│  │        @ ./Base.jl:495 [inlined]
│  │     [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
│  │        @ Base ./loading.jl:2222
│  │     [12] top-level scope
│  │        @ stdin:3
│  │     [13] eval
│  │        @ ./boot.jl:385 [inlined]
│  │     [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│  │        @ Base ./loading.jl:2076
│  │     [15] include_string
│  │        @ ./loading.jl:2086 [inlined]
│  │     [16] exec_options(opts::Base.JLOptions)
│  │        @ Base ./client.jl:316
│  │     [17] _start()
│  └        @ Base ./client.jl:552
└  
┌ MKL_jll
│   Downloading artifact: IntelOpenMP
│   Downloading artifact: oneTBB
│  
│  [pid 3034922] waiting for IO to finish:
│   Handle type        uv_handle_t->data
│   timer              0x263d7400->0x71ce9797bf40
│  This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.
└  
┌ Interpolations → InterpolationsForwardDiffExt
│  [pid 3044540] waiting for IO to finish:
│   Handle type        uv_handle_t->data
│   timer              0x2821d350->0x75405dd736a0
│  This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.
└  
┌ MLJBase → DefaultMeasuresExt
│  [pid 3059240] waiting for IO to finish:
│   Handle type        uv_handle_t->data
│   timer              0x3e2b85c0->0x75b0d4821fc0
│  This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help.
└  
  5 dependencies errored.
  For a report of the errors see `julia> err`. To retry use `pkg> precompile`

julia> using Plots
Precompiling Plots
  1 dependency successfully precompiled in 6 seconds. 170 already precompiled.
[ Info: Precompiling Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80]
┌ Warning: Module PrecompileTools with build ID fafbfcfd-b515-9891-0008-569574394322 is missing from the cache.
│ This may mean PrecompileTools [aea7be01-6a6a-4083-8856-8a6e6704d82a] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing Plots [91a5bcdd-55d7-5caf-9e0b-520d859cae80].
[ Info: Precompiling RecipesBase [3cdcf5f2-1ef4-517c-9805-6587b60abb01]
┌ Warning: Module PrecompileTools with build ID fafbfcfd-b515-9891-0008-569574394322 is missing from the cache.
│ This may mean PrecompileTools [aea7be01-6a6a-4083-8856-8a6e6704d82a] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing RecipesBase [3cdcf5f2-1ef4-517c-9805-6587b60abb01].
[ Info: Precompiling PlotThemes [ccf2f8ad-2431-5c83-bf29-c5338b663b6a]
┌ Warning: Module PrecompileTools with build ID fafbfcfd-b515-9891-0008-569574394322 is missing from the cache.
│ This may mean PrecompileTools [aea7be01-6a6a-4083-8856-8a6e6704d82a] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing PlotThemes [ccf2f8ad-2431-5c83-bf29-c5338b663b6a].
[ Info: Precompiling PlotUtils [995b91a9-d308-5afd-9ec6-746e21dbc043]
┌ Warning: Module PrecompileTools with build ID fafbfcfd-b515-9891-0008-569574394322 is missing from the cache.
│ This may mean PrecompileTools [aea7be01-6a6a-4083-8856-8a6e6704d82a] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing PlotUtils [995b91a9-d308-5afd-9ec6-746e21dbc043].
[ Info: Precompiling ColorSchemes [35d6a980-a343-548e-a6ea-1d62b119f2f4]
┌ Warning: Module PrecompileTools with build ID fafbfcfd-b515-9891-0008-569574394322 is missing from the cache.
│ This may mean PrecompileTools [aea7be01-6a6a-4083-8856-8a6e6704d82a] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing ColorSchemes [35d6a980-a343-548e-a6ea-1d62b119f2f4].
[ Info: Precompiling RecipesPipeline [01d81517-befc-4cb6-b9ec-a95719d0359c]
┌ Warning: Module RecipesBase with build ID ffffffff-ffff-ffff-000e-c801e598bc1d is missing from the cache.
│ This may mean RecipesBase [3cdcf5f2-1ef4-517c-9805-6587b60abb01] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing RecipesPipeline [01d81517-befc-4cb6-b9ec-a95719d0359c].
[ Info: Precompiling StatsBase [2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91]
┌ Warning: Module DataStructures with build ID fafbfcfd-1cf4-aad4-0008-56959a1b4541 is missing from the cache.
│ This may mean DataStructures [864edb3b-99cc-5e75-8d2d-829cb0a9cfe8] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing StatsBase [2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91].
[ Info: Precompiling SortingAlgorithms [a2af1166-a08f-5f64-846c-94a0d3cef48c]
┌ Warning: Module DataStructures with build ID fafbfcfd-1cf4-aad4-0008-56959a1b4541 is missing from the cache.
│ This may mean DataStructures [864edb3b-99cc-5e75-8d2d-829cb0a9cfe8] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing SortingAlgorithms [a2af1166-a08f-5f64-846c-94a0d3cef48c].
[ Info: Precompiling FFMPEG [c87230d0-a227-11e9-1b43-d7ebe4e7570a]
┌ Warning: Module JLLWrappers with build ID fafbfcfd-f6e9-99cf-0008-56a2dbd09208 is missing from the cache.
│ This may mean JLLWrappers [692b3bcd-3c85-4b1f-b108-f13ce0eb3210] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing FFMPEG [c87230d0-a227-11e9-1b43-d7ebe4e7570a].
[ Info: Precompiling FFMPEG_jll [b22a6f82-2f65-5046-a5b2-351ab43fb4e5]
┌ Warning: Module JLLWrappers with build ID fafbfcfd-f6e9-99cf-0008-56a2dbd09208 is missing from the cache.
│ This may mean JLLWrappers [692b3bcd-3c85-4b1f-b108-f13ce0eb3210] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1948
[ Info: Skipping precompilation since __precompile__(false). Importing FFMPEG_jll [b22a6f82-2f65-5046-a5b2-351ab43fb4e5].
ERROR: LoadError: ArgumentError: Platform `riscv64-linux-gnu` is not an officially supported platform
Stacktrace:
 [1] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String; validate_strict::Bool)
   @ Base.BinaryPlatforms ./binaryplatforms.jl:753
 [2] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String)
   @ Base.BinaryPlatforms ./binaryplatforms.jl:671
 [3] (::FFMPEG_jll.var"#parse_wrapper_platform#1")(x::Any)
   @ FFMPEG_jll ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:113
 [4] (::FFMPEG_jll.var"#make_wrapper_dict#2"{FFMPEG_jll.var"#parse_wrapper_platform#1"})(dir::Any, x::Any)
   @ FFMPEG_jll ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:145
 [5] top-level scope
   @ ~/.julia/packages/JLLWrappers/pG9bm/src/toplevel_generators.jl:160
in expression starting at /home/loman/.julia/packages/FFMPEG_jll/2rhlH/src/FFMPEG_jll.jl:2
in expression starting at /home/loman/.julia/packages/FFMPEG/a6NkO/src/FFMPEG.jl:1
in expression starting at /home/loman/.julia/packages/Plots/8ZnR3/src/animation.jl:1
in expression starting at /home/loman/.julia/packages/Plots/8ZnR3/src/Plots.jl:1
10

Share your Project.toml and Manifest.toml files, at least people can try to exactly reproduce your error.

1 Like
11 
[deps]
DSP = "717857b8-e6f2-59f4-9121-6e50c889abd2"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
DecisionTree = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb"
Flux = "587475ba-b771-5e3f-ad9e-33799f191a9c"
MLJ = "add582a8-e3ab-11e8-2d5e-e98b27df1bc7"
MLJBase = "a7f614a8-145f-11e9-1d2a-a57a1082229d"
MLJDecisionTreeInterface = "c6f25543-311c-4c74-83dc-3ea6d1015661"
MLJFlux = "094fc8d1-fd35-5302-93ea-dabda2abf845"
MLJXGBoostInterface = "54119dfa-1dab-4055-a167-80440f4f7a91"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
PrettyTables = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
Serialization = "9e88b42a-f829-5b0c-bbe9-9e923198166b"
StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"
Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
XGBoost = "009559a3-9522-5dbb-924b-0b6ed2b22bb9"

This is part of the Manifest (too big for discourse to allow it to be pasted, I tried to have the Plots parti n there)

# This file is machine-generated - editing it directly is not advised

julia_version = "1.10.4"
manifest_format = "2.0"
project_hash = "c2cbdcd9707deb4ef3212785f18f56234b792b6a"




[[deps.InvertedIndices]]
git-tree-sha1 = "6da3c4316095de0f5ee2ebd875df8721e7e0bdbe"
uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f"
version = "1.3.1"

[[deps.IrrationalConstants]]
git-tree-sha1 = "b2d91fe939cae05960e760110b328288867b5758"
uuid = "92d709cd-6900-40b7-9082-c6be49f344b6"
version = "0.2.6"

[[deps.IterTools]]
git-tree-sha1 = "42d5f897009e7ff2cf88db414a389e5ed1bdd023"
uuid = "c8e1da08-722c-5040-9ed9-7db0dc04731e"
version = "1.10.0"

[[deps.IterationControl]]
deps = ["EarlyStopping", "InteractiveUtils"]
git-tree-sha1 = "e663925ebc3d93c1150a7570d114f9ea2f664726"
uuid = "b3c1a2ee-3fec-4384-bf48-272ea71de57c"
version = "0.5.4"

[[deps.IteratorInterfaceExtensions]]
git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856"
uuid = "82899510-4779-5014-852e-03e436cf321d"
version = "1.0.0"

[[deps.JLD2]]
deps = ["FileIO", "MacroTools", "Mmap", "OrderedCollections", "PrecompileTools", "ScopedValues", "TranscodingStreams"]
git-tree-sha1 = "d97791feefda45729613fafeccc4fbef3f539151"
uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
version = "0.5.15"
weakdeps = ["UnPack"]

    [deps.JLD2.extensions]
    UnPackExt = "UnPack"

[[deps.JLFzf]]
deps = ["REPL", "Random", "fzf_jll"]
git-tree-sha1 = "82f7acdc599b65e0f8ccd270ffa1467c21cb647b"
uuid = "1019f520-868f-41f5-a6de-eb00f4b6a39c"
version = "0.1.11"

[[deps.JLLWrappers]]
deps = ["Artifacts", "Preferences"]
git-tree-sha1 = "0533e564aae234aff59ab625543145446d8b6ec2"
uuid = "692b3bcd-3c85-4b1f-b108-f13ce0eb3210"
version = "1.7.1"

[[deps.JSON]]
deps = ["Dates", "Mmap", "Parsers", "Unicode"]
git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.21.4"

[[deps.JSON3]]
deps = ["Dates", "Mmap", "Parsers", "PrecompileTools", "StructTypes", "UUIDs"]
git-tree-sha1 = "411eccfe8aba0814ffa0fdf4860913ed09c34975"
uuid = "0f8b85d8-7281-11e9-16c2-39a750bddbf1"
version = "1.14.3"

    [deps.JSON3.extensions]
    JSON3ArrowExt = ["ArrowTypes"]

    [deps.JSON3.weakdeps]
    ArrowTypes = "31f734f8-188a-4ce0-8406-c8a06bd891cd"

[[deps.JpegTurbo_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "4255f0032eafd6451d707a51d5f0248b8a165e4d"
uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8"
version = "3.1.3+0"

[[deps.JuliaVariables]]
deps = ["MLStyle", "NameResolution"]
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12

With those files I can’t instantiate the project, because I get:

(@v1.10) pkg> activate .
  Activating project at `~/Downloads/test`
ERROR: `MLJTransforms=23777cdb-d90c-4eb0-a694-7c2b83d5c1d6` depends on `BitBasis`, but no such entry exists in the manifest.

By the way, did you try with julia --startup-file=no, just to be sure it isn’t something there?

1 Like
13

On the other side, if I delete the Manifest file and instantiate the project, it worked. So maybe there is something broken with the Manifest file?

1 Like
14

I did try to remove the Manifest file and re do instantiate, but the issue appears still :frowning:

15

Well, that’s strange. I have installed it with:

julia> versioninfo()
Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 20 × 12th Gen Intel(R) Core(TM) i7-12700F
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, alderlake)
Threads: 14 default, 0 interactive, 7 GC (on 20 virtual cores)
Environment:
  JULIA_NUM_THREADS = 14

Which seems similar to what you have there.

16

It once happened to me to have strange problems because I had updated CUDA drivers and didn’t reboot the machine. I was in a unstable system state, then, and it was not anything related to Julia.