I am the local organiser of this year annual conference of the Organisation for Computational Neuroscience - CNS2017 ( CNS 2017 ) to be held in July 2017 in Antwerpen (Belgium). We expect ~700 participants from all around the world. Any (Computational) Neuroscientist around, “proficiently” using Juli…

Do you work in vivo or in vitro? I am starting to move from MATLAB to Julia for all our lab activities (simulations, data acquisition, and data analysis - patch clamp and extracellular recordings).

[image] mgiugliano: am starting to move from MATLAB to Julia for We do in vivo work, multielectrode array recordings using Intan, which we import than do our signal processing and analysis all in Julia. We use PyCall to use a python peak finding function which is very handy. The great thing w…

I discovered (but not yet studied) this GitHub repository from the people at Janelia: https://github.com/JaneliaSciComp/NIDAQ.jl It might be promising…

There is now a #neuro thread on slack if you’re interested.

Using Julia for neuroscience data acquisition over here at Karolinska (mostly imaging and ephys in slices atm) ccall makes working with NI boards, cameras, and other hardware a breeze :smiley: Seriously no idea why more neuroscientists aren’t keen on Julia…

Because Matlab is so deeply ingrained in them.

I also use Julia to process in-vivo neural data, from extracting raw data from our data acquisition system, to spike sorting, to single cell and population level analysis.

I love that I’m finding more neuroscientists here! I really want a Neuro focused github organization. I’m working on a NeuroCore.jl package that will be a hodge-podge of neuroimaging, neuroanatomy, neural graph communities, and plotting tools for them. It will likely be a very basic for traits and i…

I have quite a number of those hodge-podge packages on github: ) One that might be useful to someone is https://github.com/grero/RippleTools.jl which basically extracts data recorded from the Ripple data acquisition system ( https://rippleneuro.com ).

Any (Computational) Neuroscientist Julia user here?

Community

samo January 9, 2020, 9:57am 25

Is anybody of you part of the Human Brain Project? Please have a look at this thread. Thanks!

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Any (Computational) Neuroscientist Julia user here?

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