I tried running my package on a compute I haven’t used for two weeks:
using Catalyst
but got a weird error I do not understand:
[ Info: Precompiling Catalyst [479239e8-5488-4da2-87a7-35f2df7eef83] (cache misses: include_dependency fsize change (4), wrong dep version loaded (4), wrong source (4), dep missing source (2), mismatched flags (4))
ERROR: LoadError: ArgumentError: Platform `riscv64-linux-gnu-libgfortran5` is not an officially supported platform
Stacktrace:
[1] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String; validate_strict::Bool)
@ Base.BinaryPlatforms ./binaryplatforms.jl:752
[2] parse(::Type{Base.BinaryPlatforms.Platform}, triplet::String)
@ Base.BinaryPlatforms ./binaryplatforms.jl:691
[3] (::OpenSpecFun_jll.var"#parse_wrapper_platform#1")(x::Any)
@ OpenSpecFun_jll ~/.julia/packages/JLLWrappers/jXOYx/src/toplevel_generators.jl:113
[4] (::OpenSpecFun_jll.var"#make_wrapper_dict#2"{OpenSpecFun_jll.var"#parse_wrapper_platform#1"})(dir::Any, x::Any)
@ OpenSpecFun_jll ~/.julia/packages/JLLWrappers/jXOYx/src/toplevel_generators.jl:145
[5] top-level scope
@ ~/.julia/packages/JLLWrappers/jXOYx/src/toplevel_generators.jl:160
[6] include
@ ./Base.jl:557 [inlined]
[7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2881
[8] top-level scope
@ stdin:6
in expression starting at /home/loman/.julia/packages/OpenSpecFun_jll/4QIOW/src/OpenSpecFun_jll.jl:2
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile OpenSpecFun_jll [efe28fd5-8261-553b-a9e1-b2916fc3738e] to "/home/loman/.julia/compiled/v1.11/OpenSpecFun_jll/jl_83doAu".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
@ Base ./loading.jl:3174
[3] (::Base.var"#1110#1111"{Base.PkgId})()
@ Base ./loading.jl:2579
[4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95
[5] #mkpidlock#6
@ ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined]
[6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116
[7] #invokelatest#2
@ ./essentials.jl:1057 [inlined]
[8] invokelatest
@ ./essentials.jl:1052 [inlined]
[9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:3698
[10] maybe_cachefile_lock
@ ./loading.jl:3695 [inlined]
[11] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2565
[12] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2388
[13] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[14] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[15] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2375
[16] macro expansion
@ ./loading.jl:2314 [inlined]
[17] macro expansion
@ ./lock.jl:273 [inlined]
[18] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2271
[19] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[20] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[21] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2260
[22] include
@ ./Base.jl:557 [inlined]
[23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2881
[24] top-level scope
@ stdin:6
in expression starting at /home/loman/.julia/packages/SpecialFunctions/Zijv9/src/SpecialFunctions.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile SpecialFunctions [276daf66-3868-5448-9aa4-cd146d93841b] to "/home/loman/.julia/compiled/v1.11/SpecialFunctions/jl_RtfDRp".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
@ Base ./loading.jl:3174
[3] (::Base.var"#1110#1111"{Base.PkgId})()
@ Base ./loading.jl:2579
[4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95
[5] #mkpidlock#6
@ ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined]
[6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116
[7] #invokelatest#2
@ ./essentials.jl:1057 [inlined]
[8] invokelatest
@ ./essentials.jl:1052 [inlined]
[9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:3698
[10] maybe_cachefile_lock
@ ./loading.jl:3695 [inlined]
[11] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2565
[12] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2388
[13] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[14] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[15] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2375
[16] macro expansion
@ ./loading.jl:2314 [inlined]
[17] macro expansion
@ ./lock.jl:273 [inlined]
[18] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2271
[19] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[20] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[21] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2260
[22] include
@ ./Base.jl:557 [inlined]
[23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2881
[24] top-level scope
@ stdin:6
in expression starting at /home/loman/.julia/packages/ForwardDiff/UBbGT/src/ForwardDiff.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile ForwardDiff [f6369f11-7733-5829-9624-2563aa707210] to "/home/loman/.julia/compiled/v1.11/ForwardDiff/jl_twjZ4D".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
@ Base ./loading.jl:3174
[3] (::Base.var"#1110#1111"{Base.PkgId})()
@ Base ./loading.jl:2579
[4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95
[5] #mkpidlock#6
@ ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined]
[6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116
[7] #invokelatest#2
@ ./essentials.jl:1057 [inlined]
[8] invokelatest
@ ./essentials.jl:1052 [inlined]
[9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:3698
[10] maybe_cachefile_lock
@ ./loading.jl:3695 [inlined]
[11] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2565
[12] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2388
[13] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[14] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[15] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2375
[16] macro expansion
@ ./loading.jl:2314 [inlined]
[17] macro expansion
@ ./lock.jl:273 [inlined]
[18] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2271
[19] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[20] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[21] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2260
[22] include
@ ./Base.jl:557 [inlined]
[23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2881
[24] top-level scope
@ stdin:6
in expression starting at /home/loman/.julia/packages/DiffEqBase/R2Vjs/src/DiffEqBase.jl:1
in expression starting at stdin:6
ERROR: LoadError: Failed to precompile DiffEqBase [2b5f629d-d688-5b77-993f-72d75c75574e] to "/home/loman/.julia/compiled/v1.11/DiffEqBase/jl_a6FfhX".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
@ Base ./loading.jl:3174
[3] (::Base.var"#1110#1111"{Base.PkgId})()
@ Base ./loading.jl:2579
[4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95
[5] #mkpidlock#6
@ ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined]
[6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116
[7] #invokelatest#2
@ ./essentials.jl:1057 [inlined]
[8] invokelatest
@ ./essentials.jl:1052 [inlined]
[9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:3698
[10] maybe_cachefile_lock
@ ./loading.jl:3695 [inlined]
[11] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2565
[12] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2388
[13] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[14] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[15] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2375
[16] macro expansion
@ ./loading.jl:2314 [inlined]
[17] macro expansion
@ ./lock.jl:273 [inlined]
[18] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2271
[19] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[20] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[21] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2260
[22] include
@ ./Base.jl:557 [inlined]
[23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
@ Base ./loading.jl:2881
[24] top-level scope
@ stdin:6
in expression starting at /home/loman/.julia/dev/Catalyst/src/Catalyst.jl:1
in expression starting at stdin:6
ERROR: Failed to precompile Catalyst [479239e8-5488-4da2-87a7-35f2df7eef83] to "/home/loman/.julia/compiled/v1.11/Catalyst/jl_Xtu0vE".
Stacktrace:
[1] error(s::String)
@ Base ./error.jl:35
[2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{…}, loadable_exts::Nothing)
@ Base ./loading.jl:3174
[3] (::Base.var"#1110#1111"{Base.PkgId})()
@ Base ./loading.jl:2579
[4] mkpidlock(f::Base.var"#1110#1111"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95
[5] #mkpidlock#6
@ ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined]
[6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
@ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.2+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116
[7] #invokelatest#2
@ ./essentials.jl:1057 [inlined]
[8] invokelatest
@ ./essentials.jl:1052 [inlined]
[9] maybe_cachefile_lock(f::Base.var"#1110#1111"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
@ Base ./loading.jl:3698
[10] maybe_cachefile_lock
@ ./loading.jl:3695 [inlined]
[11] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2565
[12] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2388
[13] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[14] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[15] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2375
[16] macro expansion
@ ./loading.jl:2314 [inlined]
[17] macro expansion
@ ./lock.jl:273 [inlined]
[18] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2271
[19] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[20] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[21] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2260
Some type information was truncated. Use `show(err)` to see complete types.
It is on Julia v1.11.2 and the package is latest version. I saw this issue: DSP.jl loading error and tried running Pkg.update in my default environment:
(@v1.11) pkg> st
Status `~/.julia/environments/v1.11/Project.toml`
[e30172f5] Documenter v1.8.0
[5903a43b] Infiltrator v1.8.3
[98e50ef6] JuliaFormatter v1.0.62
[5fb14364] OhMyREPL v0.5.28
⌃ [295af30f] Revise v3.6.2
Info Packages marked with ⌃ have new versions available and may be upgradable.
(@v1.11) pkg> update
Updating registry at `~/.julia/registries/General.toml`
Installed JuliaInterpreter ─ v0.9.38
Installed LoweredCodeUtils ─ v3.1.0
Installed Revise ─────────── v3.7.1
Updating `~/.julia/environments/v1.11/Project.toml`
[295af30f] ↑ Revise v3.6.2 ⇒ v3.7.1
Updating `~/.julia/environments/v1.11/Manifest.toml`
[1019f520] ↑ JLFzf v0.1.8 ⇒ v0.1.9
[692b3bcd] ↑ JLLWrappers v1.6.1 ⇒ v1.7.0
[aa1ae85d] ↑ JuliaInterpreter v0.9.36 ⇒ v0.9.38
[6f1432cf] ↑ LoweredCodeUtils v3.0.5 ⇒ v3.1.0
[bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.7.0
[295af30f] ↑ Revise v3.6.2 ⇒ v3.7.1
[2e619515] ↑ Expat_jll v2.6.4+1 ⇒ v2.6.4+3
[458c3c95] ↑ OpenSSL_jll v3.0.15+1 ⇒ v3.0.15+3
[214eeab7] ↑ fzf_jll v0.53.0+0 ⇒ v0.56.3+0
[8ba89e20] - Distributed v1.11.0
Precompiling project...
✓ JuliaInterpreter
✓ LoweredCodeUtils
✓ Revise
3 dependencies successfully precompiled in 21 seconds. 68 already precompiled.
3 dependencies precompiled but different versions are currently loaded. Restart julia to access the new versions
Info We haven't cleaned this depot up for a bit, running Pkg.gc()...
Active manifest files: 27 found
Active artifact files: 213 found
Active scratchspaces: 5 found
Deleted 18 package installations (12.951 MiB)
Deleted 16 artifact installations (215.969 MiB)
(@v1.11) pkg>
This did update some stuff. But when I tried again using Catalyst
in the first environment (after restarting Julia) I still got the same error.