I am trying to compute the hamming distance on a very large dataset. I need to get back a distance matrix between rows in order to run further analysis on this matrix. For my purposes, it is useful that the data are stored in a DataFrame type. using DataFrames The data looks something like this a…

Fast hamming distance function in Julia that returns a distance matrix

lungben February 21, 2021, 6:13pm 12

I do not know if this is the most efficient way for matrices, but for pair-wise Hamming distance this way was the fastest I could find:

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