I am trying to create some benchmarks for the MixedModels
package using BenchmarkTools
. The instructions emphasize that you need to be careful about escaping symbols in a call to @benchmarkable
but apparently I am not being careful enough. My current code is
https://github.com/dmbates/MixedModels.jl/blob/termsRefactor/benchmark/runbenchmark.jl
A call to fitlmm
should have two symbols and a string like
julia> @benchmark fitlmm(:Animal, "1+(1|G)+(1|H)", :LN_BOBYQA) seconds=1
BenchmarkTools.Trial:
memory estimate: 135.95 KiB
allocs estimate: 2602
--------------
minimum time: 849.243 μs (0.00% GC)
median time: 863.792 μs (0.00% GC)
mean time: 905.967 μs (3.51% GC)
maximum time: 7.211 ms (80.99% GC)
--------------
samples: 1101
evals/sample: 1
but the current code croaks on tune!(suite)
with
UndefVarError: Animal not defined
Can someone suggest a workaround?