Is boolean indexing 100 times slower in 1.0?

You can fix the problem by the following:

julia> using BenchmarkTools

julia> d=rand(10_000); m=rand(Bool, 10_000);

julia> @btime getindex($d,$m);
  742.062 μs (23906 allocations: 643.13 KiB)

julia> Base.@propagate_inbounds function Base.iterate(L::Base.LogicalIndex, s)
           # We're looking for the n-th true element, using iterator r at state i
           n = s[1]
           n > length(L) && return nothing
           idx, i = iterate(Base.tail(s)...)
           s = (n+1, s[2], i)
           L.mask[idx] && return (idx, s)

           
           while true
               idx, i = iterate(Base.tail(s)...)
               s = (n+1, s[2], i)
               L.mask[idx] && return (idx, s)
           end
           end

julia> @btime getindex($d,$m);
  49.477 μs (4 allocations: 38.63 KiB)