For posteriority I record the solution, which turned out to be simple:
Note that my path structure was:
-Main folder
–Subfolder 1
–Subfolder 2
The Julia code lives in Subfolder 1, while the data the Julia code calls lives in Subfolder 2.
Through “…/”, the relative path goes up to the main folder first. By making Subfolder 2 the current working directory, all relative paths work as intendend.