[ANN] NeuroAnalyzer.jl

Specific Domains Biology, Health, and Medicine
1

NeuroAnalyzer.jl: EEG/MEG/NIRS/NIBS analysis with Julia

v0.22.11 is out: https://codeberg.org/AdamWysokinski/NeuroAnalyzer.jl

Major changes:

  • user-managed preferences
  • virtual channels
  • progress meter
  • continuous and discrete wavelet transformations
  • Hilbert transformation envelope
  • improved connectivity plot
  • proper handling of negative frequencies in FFT spectrum
  • Jupyter notebook
  • many minor additions and fixes
7 Likes
2

NeuroAnalyzer.jl: EEG/MEG/NIRS/NIBS analysis with Julia

v0.22.12 is out: https://codeberg.org/AdamWysokinski/NeuroAnalyzer.jl

Major changes:

  • plotting functions were completely rewritten
  • new plot types added (multi-channel PSD, eeg_plot_stats())
  • import BrainVision
  • tutorials at https://neuroanalyzer.org/#tutorials
  • eeg_*() functions now operate on specified channels
  • improved auto-detection of bad channels/epochs
  • many minor additions and fixes
1 Like
3

NeuroAnalyzer.jl: EEG/MEG/NIRS/NIBS analysis with Julia

v0.23.01 is out: https://codeberg.org/AdamWysokinski/NeuroAnalyzer.jl

Major changes:

  • automated epoching by event markers
  • ERP: create, plot
  • interpolate EEG channel using linear regression
  • continuous integration (CI): tests, documentation, website
  • more tutorials
  • many minor additions and fixes
2 Likes
4

NeuroAnalyzer.jl: EEG/MEG/NIRS/NIBS analysis with Julia

v0.23.02 is out: https://codeberg.org/AdamWysokinski/NeuroAnalyzer.jl

Major changes:

  • import Philips Alice4 polysomnography EDF (non-standard, multi-sampling rate)
  • user defined number of Slepian tapers for PSD
  • processing of electrode locations updated, added rotating and scaling
  • code cleanup
  • more tutorials
  • many minor additions and fixes
1 Like
5

NeuroAnalyzer.jl: EEG/MEG/NIRS/NIBS analysis with Julia

v0.23.3 is out: https://codeberg.org/AdamWysokinski/NeuroAnalyzer.jl

Major changes:

  • import: EEGLAB .set files (WIP)
  • import: CSV files
  • import: GEO electrode locations
  • process: transform using surface Laplacian
  • process: improved FIR filter (automated filtering window)
  • process: improved polynomial filter
  • plot: 3D dipole plot (WIP)
1 Like
6

NeuroAnalyzer.jl: EEG/MEG/NIRS/NIBS analysis with Julia

v0.23.4 is out: https://codeberg.org/AdamWysokinski/NeuroAnalyzer.jl

Major changes:

  • complete rewriting of NeuroAnalyzer functions
  • new architecture allows easy expanding for new types of neurophysiological data
  • new data types: EEG, NIRS, MEG
  • new channel types (csd, nirs, mag, grad, meg)
  • import: NIRS/SNIRF/NIRX files (NIRS)
  • import: MEG FIFF files (very WIP)
  • process: convert intensity to optical density (NIRS)
  • process: convert optical density to HbO/HbR/HbT concentrations (NIRS)
  • plot: new way of plotting channels of different types
  • plot: 2D dipole plot (WIP)
  • unit tests were completely rewritten
1 Like