Hi everyone, I’d like to announce four packages I’ve written that may be of interest to anyone working with surface-space representations of fMRI data in Julia. First of all, there’s CIFTI.jl , a very basic and easy-to-use interface for reading and writing surface-space neuroimaging files of the CIF…

Could you explain parcellation simply please? Yeah… I should do a search.

Sure. A parcellation is basically just the segmentation of the brain into regions. It can be used as a dimensionality reduction technique, for example. There are many ways out there of doing that. WatershedParcellation.jl implements one particular well-known (in the field) method. CorticalParcels.j…

For anyone working with surface space fMRI data (e.g. CIFTI and GIFTI files), I’d like to announce that I’ve finished up some substantial updates to my CIFTI.jl package mentioned above, and to related packages in my fMRI mini-ecosystem: CorticalSurfaces , CorticalParcels , and, especially, ObservableC…

Hey @myersm0 ! We have a bunch of folks who may be interested in this work from within JuliaHealth – we are active in the #health-and-medicine channel on the Julia Slack . Feel free to share over there too! Congrats on the new updates and releases! Additionally, I’ll CC @cncastillo @Jakub_Mitura too…

[ANN] Four new fMRI-related packages: CIFTI.jl, WatershedParcellation.jl, and more

Package Announcements

johnh November 14, 2023, 10:44am 4

Thankyou. I worked in medical imaging many years ago. The research group I was alongside at Kings was starting work on brain atlases. I guess the state of the art in that field has improved greatly due to early foundations.

Topic		Replies	Views
[ANN] New package: ObservableCortex.jl for surface-space fMRI data visualization Package Announcements announcement	0	315	November 28, 2023
[ANN] Announcing GIFTI.jl for neuroimaging data Package Announcements	4	178	March 12, 2026
JuliaCon 2023 - MRI Compressed Sensing and Denoising in Julia (MRICompress.jl) request to solve your sparse big data problem Package Announcements	0	299	July 29, 2023
[ANN] Parquet2.jl Package Announcements data , parquet , tables , serialization	20	7856	May 8, 2024
[ANN] Meshes.jl - Computational Geometry in Julia Package Announcements package , announcement , mesh , geo , geometry	58	13874	April 9, 2026

[ANN] Four new fMRI-related packages: CIFTI.jl, WatershedParcellation.jl, and more

Related topics