I got another error after same procedure: updating pluto dependencies also updated plots
┌ Warning: Module Libtiff_jll with build ID ffffffff-ffff-ffff-0011-7bc9495eb81f is missing from the cache.
│ This may mean Libtiff_jll [89763e89-9b03-5906-acba-b20f662cd828] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1793
┌ Warning: The call to compilecache failed to create a usable precompiled cache file for GR_jll [d2c73de3-f751-5644-a686-071e5b155ba9]
│ exception = Required dependency libwebp_jll [c5f90fcd-3b7e-5836-afba-fc50a0988cb2] failed to load from a cache file.
└ @ Base loading.jl:1818
┌ Warning: Module Libtiff_jll with build ID ffffffff-ffff-ffff-0011-7bc9ca94fed4 is missing from the cache.
│ This may mean Libtiff_jll [89763e89-9b03-5906-acba-b20f662cd828] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1793
┌ Warning: The call to compilecache failed to create a usable precompiled cache file for GR [28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71]
│ exception = Required dependency libwebp_jll [c5f90fcd-3b7e-5836-afba-fc50a0988cb2] failed to load from a cache file.
└ @ Base loading.jl:1818
┌ Warning: Module Libtiff_jll with build ID ffffffff-ffff-ffff-0011-7bcb239ffdbe is missing from the cache.
│ This may mean Libtiff_jll [89763e89-9b03-5906-acba-b20f662cd828] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1793
┌ Warning: The call to compilecache failed to create a usable precompiled cache file for GR_jll [d2c73de3-f751-5644-a686-071e5b155ba9]
│ exception = Required dependency libwebp_jll [c5f90fcd-3b7e-5836-afba-fc50a0988cb2] failed to load from a cache file.
└ @ Base loading.jl:1818
┌ Warning: Module Libtiff_jll with build ID ffffffff-ffff-ffff-0011-7bcb8d2be57c is missing from the cache.
│ This may mean Libtiff_jll [89763e89-9b03-5906-acba-b20f662cd828] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:1793
ERROR: LoadError: UndefRefError: access to undefined reference
Stacktrace:
[1] getproperty
@ ./Base.jl:37 [inlined]
[2] getindex
@ ./refvalue.jl:56 [inlined]
[3] load_libs(always::Bool)
@ GR ~/.julia/packages/GR/hbmas/src/funcptrs.jl:38
[4] get_func_ptr(handle::Base.RefValue{Ptr{Nothing}}, ptrs::GR.LibGR_Ptrs, func::Symbol, loaded::Bool)
@ GR ~/.julia/packages/GR/hbmas/src/funcptrs.jl:75
[5] get_func_ptr
@ ~/.julia/packages/GR/hbmas/src/funcptrs.jl:75 [inlined]
[6] libGR_ptr
@ ~/.julia/packages/GR/hbmas/src/funcptrs.jl:84 [inlined]
[7] setcharheight(height::Float64)
@ GR ~/.julia/packages/GR/hbmas/src/GR.jl:1551
[8] gr_set_font(f::Plots.Font, s::Plots.Subplot{Plots.GRBackend}; halign::Symbol, valign::Symbol, color::ColorTypes.RGB{FixedPointNumbers.N0f8}, rotation::Int64)
@ Plots ~/.julia/packages/Plots/rz1WP/src/backends/gr.jl:431
[9] gr_set_tickfont(sp::Plots.Subplot{Plots.GRBackend}, ax::Plots.Axis; kw::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Plots ~/.julia/packages/Plots/rz1WP/src/backends/gr.jl:694
[10] gr_set_tickfont(sp::Plots.Subplot{Plots.GRBackend}, ax::Plots.Axis)
@ Plots ~/.julia/packages/Plots/rz1WP/src/backends/gr.jl:694
[11] _update_min_padding!(sp::Plots.Subplot{Plots.GRBackend})
@ Plots ~/.julia/packages/Plots/rz1WP/src/backends/gr.jl:870
[12] iterate
@ ./generator.jl:47 [inlined]
[13] _collect(c::Matrix{RecipesBase.AbstractLayout}, itr::Base.Generator{Matrix{RecipesBase.AbstractLayout}, typeof(Plots._update_min_padding!)}, #unused#::Base.EltypeUnknown, isz::Base.HasShape{2})
@ Base ./array.jl:802
[14] collect_similar
@ ./array.jl:711 [inlined]
[15] map
@ ./abstractarray.jl:3261 [inlined]
[16] _update_min_padding!(layout::Plots.GridLayout)
@ Plots ~/.julia/packages/Plots/rz1WP/src/layouts.jl:277
[17] prepare_output(plt::Plots.Plot{Plots.GRBackend})
@ Plots ~/.julia/packages/Plots/rz1WP/src/plot.jl:239
[18] show
@ ~/.julia/packages/Plots/rz1WP/src/output.jl:231 [inlined]
[19] #344
@ ~/.julia/packages/Plots/rz1WP/src/output.jl:6 [inlined]
[20] open(::Plots.var"#344#345"{Plots.Plot{Plots.GRBackend}}, ::String, ::Vararg{String}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base ./io.jl:395
[21] open
@ ./io.jl:392 [inlined]
[22] png(plt::Plots.Plot{Plots.GRBackend}, fn::String)
@ Plots ~/.julia/packages/Plots/rz1WP/src/output.jl:6
[23] savefig(plt::Plots.Plot{Plots.GRBackend}, fn::String)
@ Plots ~/.julia/packages/Plots/rz1WP/src/output.jl:149
[24] var"##1#293"()
@ Plots ~/.julia/packages/Plots/rz1WP/src/init.jl:111
[25] top-level scope
@ ~/.julia/packages/Plots/rz1WP/src/init.jl:118
[26] eval
@ ./boot.jl:370 [inlined]
[27] eval
@ ~/.julia/packages/Plots/rz1WP/src/Plots.jl:1 [inlined]
[28] _broadcast_getindex_evalf
@ ./broadcast.jl:683 [inlined]
[29] _broadcast_getindex
@ ./broadcast.jl:656 [inlined]
[30] getindex
@ ./broadcast.jl:610 [inlined]
[31] copy
@ ./broadcast.jl:912 [inlined]
[32] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, typeof(Plots.eval), Tuple{Vector{Expr}}})
@ Base.Broadcast ./broadcast.jl:873
[33] macro expansion
@ ~/.julia/packages/Plots/rz1WP/src/init.jl:126 [inlined]
[34] macro expansion
@ ~/.julia/packages/PrecompileTools/0yi7r/src/workloads.jl:74 [inlined]
[35] (::Plots.var"#557#558")()
@ Plots ~/.julia/packages/Plots/rz1WP/src/init.jl:123
[36] withenv(f::Plots.var"#557#558", keyvals::Pair{String, String})
@ Base ./env.jl:197
[37] macro expansion
@ ~/.julia/packages/Plots/rz1WP/src/init.jl:122 [inlined]
[38] top-level scope
@ ~/.julia/packages/PrecompileTools/0yi7r/src/workloads.jl:136
[39] include(mod::Module, _path::String)
@ Base ./Base.jl:457
[40] include(x::String)
@ Plots ~/.julia/packages/Plots/rz1WP/src/Plots.jl:1
[41] top-level scope
@ ~/.julia/packages/Plots/rz1WP/src/Plots.jl:176
[42] include
@ ./Base.jl:457 [inlined]
[43] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
@ Base ./loading.jl:2045
[44] top-level scope
@ stdin:3
in expression starting at /home/jolin_user/.julia/packages/Plots/rz1WP/src/init.jl:87
in expression starting at /home/jolin_user/.julia/packages/Plots/rz1WP/src/Plots.jl:1
in expression starting at stdin:3
completely different error, but for sure again because there is a wrong GR package somehow loaded