# Julia implementations of Pavel Pevzner algorithms and Deep Learning with Flux github repositories

**URL:** https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809
**Category:** Package Announcements
**Created:** [February 24, 2026, 9:20am UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809 "2026-02-24T09:20:17Z")
**Posts on this page:** 8
**Page:** 1

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### Author: ![Stergios\_Papadimitri](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/stergios_papadimitri/32/216738_2.png) [@Stergios\_Papadimitri](https://discourse.julialang.org/u/Stergios_Papadimitri)
#### Post date: [February 24, 2026, 9:20am UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/1 "2026-02-24T09:20:18Z")

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I like to announce two new github repositories.  
The first one implements Bioinformatics Algorithms from the book “Bioinformatics Algorithms, 2nd and 3nd edition” of Pavel Pevzner et. all

> **[GitHub - sterglee/JuliaPavelPevznerBioinformaticsAlgorithms: Julia implementation of the book "Bioinformatics...](https://github.com/sterglee/JuliaPavelPevznerBioinformaticsAlgorithms)**
>
> Julia implementation of the book "Bioinformatics Algorithms .." of Pavel Pevzner et. all

The other one Deep Learning examples with the Flux framework:

> **[GitHub - sterglee/JuliaDeepLearningFluxExamples](https://github.com/sterglee/JuliaDeepLearningFluxExamples)**
>
> Contribute to sterglee/JuliaDeepLearningFluxExamples development by creating an account on GitHub.

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### Author: ![nilshg](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/nilshg/32/2283_2.png) [@nilshg](https://discourse.julialang.org/u/nilshg)
#### Post date: [February 24, 2026, 10:52am UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/2 "2026-02-24T10:52:25Z")

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In case you are still posting these obscured plain-text links because you initially weren’t allowed to post proper links: your new user restrictions have been lifted, so you should be able go post proper links

> **[GitHub - sterglee/JuliaPavelPevznerBioinformaticsAlgorithms: Julia implementation of the book "Bioinformatics...](https://github.com/sterglee/JuliaPavelPevznerBioinformaticsAlgorithms)**
>
> Julia implementation of the book "Bioinformatics Algorithms .." of Pavel Pevzner et. all

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### Author: ![j\_u](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/j_u/32/219081_2.png) [@j\_u](https://discourse.julialang.org/u/j_u)
#### Post date: [February 25, 2026, 11:43am UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/3 "2026-02-25T11:43:09Z")

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> [@Stergios\_Papadimitri](#):
>
> The other one Deep Learning examples with the Flux framework:

Thanks! I’m wondering whether the Mamba 2 architecture would also be of interest to you. In a sense, is there perhaps any chance of obtaining a reference example of Mamba 2 as well?

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### Author: ![Stergios\_Papadimitri](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/stergios_papadimitri/32/216738_2.png) [@Stergios\_Papadimitri](https://discourse.julialang.org/u/Stergios_Papadimitri)
#### Post date: [February 25, 2026, 2:13pm UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/4 "2026-02-25T14:13:37Z")

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Interested architecture!

I worked an example but only with AI, and I will try to read some articles.

Thank you!

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### Author: ![j\_u](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/j_u/32/219081_2.png) [@j\_u](https://discourse.julialang.org/u/j_u)
#### Post date: [February 25, 2026, 8:38pm UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/5 "2026-02-25T20:38:34Z")

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You’re welcome!

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### Author: ![j\_u](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/j_u/32/219081_2.png) [@j\_u](https://discourse.julialang.org/u/j_u)
#### Post date: [February 26, 2026, 6:45pm UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/6 "2026-02-26T18:45:32Z")

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And how is it going, if I may ask? Harder than expected? Is is the State Space Duality or maybe Flux not elastic enough?

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### Author: ![Stergios\_Papadimitri](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/stergios_papadimitri/32/216738_2.png) [@Stergios\_Papadimitri](https://discourse.julialang.org/u/Stergios_Papadimitri)
#### Post date: [February 27, 2026, 11:55am UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/7 "2026-02-27T11:55:09Z")

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I do not understand yet well the theory, I have currently other tasks, if I will return to it I will inform you

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### Author: ![j\_u](https://sea2.discourse-cdn.com/julialang/user_avatar/discourse.julialang.org/j_u/32/219081_2.png) [@j\_u](https://discourse.julialang.org/u/j_u)
#### Post date: [February 27, 2026, 2:43pm UTC](https://discourse.julialang.org/t/julia-implementations-of-pavel-pevzner-algorithms-and-deep-learning-with-flux-github-repositories/135809/8 "2026-02-27T14:43:31Z")

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Sure and thanks again for the examples. Although, I’m less active on this forum lately, I remain interested in this topic. If you’d like to contact me in the future, probably best is to send me a direct message.
